Herbaspirillum seropedicae SmR1: Hsero_3108
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Entry
Hsero_3108 CDS
T01268
Name
(GenBank) permease transmembrane protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_3108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3108
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Hsero_3108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
ADJ64592
UniProt:
D8J0N6
LinkDB
All DBs
Position
complement(3562207..3563337)
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AA seq
376 aa
AA seq
DB search
MIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVIALIGFQSLNYM
PIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVLRFGWPIVALVAALSFVA
TPWANQQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIG
ADGKNSVVVAKEGETVIDPDGEKFVVMNQGRRYDGSPGLPDFQIVDFERYGLLIGNQSQN
AAGERSARALQMNELVAKNDGYARGELLWRIALPFMALTLMLLAIPLSFVNPRAGRSLGL
LVALLLFVVYSNTVSVFQASVAQGRATFMMAWWPVHVVVVLLIVGMFALRLNINHPYHPS
RLWSRVRRAMTFQREA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattttccagcgcgcacttcgacgcgaattgaccagcaccgcaggtggggtcttcacg
acgctgttcaccatcaccctgaccgtgatgctcatcaagatactgggccaggccgccggc
ggccaggtcgcctcccaggacgtgatcgccctgatcggcttccagtccctgaactacatg
cccatcatcctcatcctcaccggtttcatctcggtgctgctggtgatgacgcgcagctac
caggattccgagatagtggtctggttcgcctgcggcatgtcgctgacccgctggatcgct
ccggtgctgcgtttcggctggcccatcgtggccctggtggcggcgctgtccttcgtggcc
acgccctgggccaaccagcagagcagcgaataccgcagccgcttcgagcagcgcgaggac
atcgcccgggtctcgccgggcaagttccaggagtccgctgcggccaaccgcatcttcttt
gtcgagggcatttcgggcgacgcctccaaggtgcgcaacatcttcgtcaataccatcggc
gccgatggcaagaacagcgtggtggtggccaaggaaggcgaaaccgtcatcgatcccgac
ggcgagaagttcgtggtcatgaaccagggccgccgctatgacggctcgcccggcctgccg
gacttccagatcgtcgacttcgaacgctatgggctgctgatcggcaaccagtcccagaac
gctgccggcgagcgctcggcgcgggccttgcagatgaatgagctggtggccaagaacgac
ggctacgcccgcggcgaactgctctggcgcatcgccttgcccttcatggcgctgaccctg
atgctgctggccatcccgctgtccttcgtcaatccgcgcgccggacggtcgctgggcctc
ctggtggcgctgctgctgttcgtggtctacagcaatacggtcagcgtgttccaggcctcg
gtggcgcagggccgcgccaccttcatgatggcctggtggccggtccacgtggtcgtggtc
ctgctgatcgtgggcatgttcgcgctgcgcctgaacatcaaccatccctatcatccatcc
cggttgtggagccgtgtgcgccgcgccatgacgttccagcgcgaggcctga
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