Herbaspirillum seropedicae SmR1: Hsero_3121
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Entry
Hsero_3121 CDS
T01268
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_3121 (prpR)
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hsero_3121 (prpR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
HTH_50
AAA_2
Hjc
AAA
TniB
DUF815
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADJ64605
UniProt:
D8J136
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Position
3577426..3579060
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AA seq
544 aa
AA seq
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MKRPAPVDRHADKPVIWTVSVSRLSELFRDITLEFDALADIEPIHLGFDDAVREIRERLA
TERCDVVISAGSNGAYLKSRLPVPVIVARASGFDVMQALARARQLTRRIALVTYQEAMPA
LAEFGQRFGLEIVQRTYATEEDARAVVNELKAAGIEAVAGAGLITDLAEEAGMRGIFLYS
AATVRQAFEDALELARLTQLESTRSPILPVADSLRARHHLKDLRGDSAEMETVRQSITLF
ARSPANVLIQGETGTGKELAAQAIHRAHPLMQGKTQAAHPFVAINCGALAESLLESELFG
YEEGAFTGSRRGGRAGVFEAAHRGTLLLDEIGEMPLPLQTRLLRVLEEREVVRVGGTRPI
PVQVRIISATHCDLQARVREGRFRADLYYRLSVLCLQLPPLRERRDDIAALAEWHLKHAL
AALDVRPHANLGAEIVRCAPLLCRYDWPGNVRELRNLMERLALFLAAEPLQALTPALIQR
VAPELGQAPPSPAAPDEAQENITPDNASIAAALRRFRGNRAAAARYLGMSRTTLWRKLKE
SGTT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcccgcccctgtcgatcgtcatgccgacaaacccgtgatctggacggtgtcg
gtgtcacggctatccgagctgttccgcgacatcacgctggaattcgacgccctggccgac
atcgagcccatccatctgggctttgacgacgccgtgcgcgagatccgcgaacgcctggcg
accgagcgctgcgatgtggtcatctcggccggctccaatggcgcctacctcaagagccgc
ctgccggtgccggtgatcgtggcgcgcgccagcggctttgacgtgatgcaggcgctggcg
cgggctcgccagctcacccgccgcattgcgctggtgacctatcaggaagccatgccggcg
ctggccgagttcggccagcgctttggcctggagatcgtccagcgcacctatgccaccgaa
gaagacgcgcgcgccgtcgtcaacgaattgaaggccgccggcatcgaagccgtcgccggc
gcagggctcatcaccgacctggccgaggaggcgggcatgcgcggcatcttcctgtattcc
gccgccacggtgcggcaagccttcgaggatgcgctggaactggcgcgactgacgcaactg
gaaagcacgcgcagccccatcctgccggtggccgacagcctgcgcgcgcggcatcacctc
aaggacctgcgcggcgactcggcggagatggaaacggtgcgccaatccattaccctgttt
gcgcgctcgccggccaatgtgctgatccagggcgagaccggcaccggcaaggaattggcg
gcacaagccatccaccgcgctcatccgctgatgcagggcaagacccaggcggcgcatccc
ttcgtggccatcaattgcggcgcactggccgaatccctgctggaatccgaactcttcgga
tatgaggaaggcgcctttaccggttcgcgccggggcgggcgtgccggcgtgttcgaggca
gcgcatcgtggcaccctgttgctcgatgaaatcggcgagatgcccctgcccttgcagacg
cgcctgctgcgcgtgctggaagagcgcgaggtagtacgcgtaggcggcacccggcccatc
ccggtccaggtgcgcatcatcagcgccacccactgcgatctccaagcgcgggtgcgtgaa
gggcgtttccgcgccgacctgtattaccgtctcagcgtgctgtgcctgcaactgcccccg
ctgcgtgagcgccgcgacgacattgcggcgctggccgaatggcatctcaagcacgcactg
gccgcgctggatgtgcgcccgcatgccaacctgggcgctgagatcgtacgctgcgcgccg
ctgttgtgccgctatgactggccgggcaatgtgcgcgagctgcgcaatctgatggaaagg
ctggcgctgttcctggccgccgaacccttgcaggccctcacgccggcgctgatccagcgc
gtcgcgcccgagctggggcaggcgccgccctccccggcggcacccgatgaggctcaagaa
aacatcacgcccgacaacgcaagcatcgccgccgcactgcgccggtttcggggcaatcgt
gctgcggcagccaggtatctgggcatgagtcggaccaccttgtggcgcaagctaaaggaa
agcggcaccacctga
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