Herbaspirillum seropedicae SmR1: Hsero_3124
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Entry
Hsero_3124 CDS
T01268
Symbol
cheD2
Name
(GenBank) methyl-accepting chemotaxis sensory transducer protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
hse02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_3124 (cheD2)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Hsero_3124 (cheD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hse02035
]
Hsero_3124 (cheD2)
Bacterial motility proteins [BR:
hse02035
]
Flagellar system
Chemotaxis proteins
MCPs
Hsero_3124 (cheD2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
TarH
Mod_r
Bromo_TP
DUF4200
NOG1_N
Motif
Other DBs
NCBI-ProteinID:
ADJ64608
UniProt:
D8J139
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All DBs
Position
3581189..3582784
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AA seq
531 aa
AA seq
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MLGFSILILFMAALGGTSLYIMGKINAQLVDVQGNWMPSVTTAQTMLAEMRAVNLAQYRA
LTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQALLARYIQIGDQL
PQSVEQGKEEEAANTMKDTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQASYAQSHLTI
IAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLELKSNDNGSLM
RSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLEETASSMEELT
STVQQNAGNAKQASSMASAGAEVARRGEAEIADVVATMREMSVSSHQMSDIISVIEGISF
QTNILALNAAVEAARAGENGRGFAVVASEVRALAQRSSAAAKEIKDLIEDSVGRIRNGSQ
LVEAAGATIAEIMQSSVRTTDLMKEIAAASEEQSAGIGQVNTAIVQMDQVTQQNAALVEE
AAAAAQSMMQQAQALTAAVSVFKLDDQALRTLPGMPAAPQLGRSLATPALS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcttttccatcctgatcctcttcatggctgcgctgggaggaacgtccctctac
atcatgggcaagatcaacgcccagctggtcgacgtccagggcaactggatgcccagcgtg
actaccgcgcaaaccatgctggccgagatgcgggcggtcaacctggcccagtaccgcgcc
ctgaccgccgacaatgcgcagcgcatgcaagacgcccgcacccgcatcaccgctgccctg
ggacgctacaccaaggccagcgagcagtaccgccacctcatcagctcgccggccgaacag
agcgcctacgatgaactgcaggccttgctggcccgctatatccagatcggcgaccagttg
ccgcaaagcgtggagcaaggcaaggaagaagaagccgccaacaccatgaaggacacgctc
tatccggtgcgtaccgccatggaagccaagatccagcagatcatcaagatcaaccaggaa
ggcgcggcgcaggcggtcgaacacggccaggccagctatgcgcaaagccacctcaccatc
atcgccttcaccctggccgcggcactggcgggactgggcattgcgctgctgatcagccgc
cgcctcacgcgccagctcggaggtgaaccgggcgaggcgatgtggctgtcgggccagatc
gccgccggcaacctggcggcgcggctggaactcaagagcaatgacaacggcagcctgatg
cgctcgctgatgatcatgcgcgaccagctcagcggcctggtgggccagatccagcatgcc
agcacgtccatccacgtggctgcccaggagatcgcgcagggcaacatcgatctctcgcag
cgcaccgaagaacaggccgcctcgctggaagaaaccgcctccagcatggaagaactgacc
agcactgtgcaacagaatgccggtaacgccaagcaggccagcagcatggccagcgccggt
gcagaagtggcgcgccggggcgaggccgagatcgccgacgtggtggcgacgatgcgcgag
atgagcgtgagctcgcaccagatgtcggacatcatcagcgtcatcgaaggcatttccttc
cagaccaatatcctggccctcaacgctgccgtggaagcggcccgcgccggcgagaacgga
cgcggcttcgccgtggtcgcctcggaagtgcgcgcgctggcccagcgcagctcggccgcg
gccaaggaaatcaaggacctgatcgaagactcggtggggcgcatccgcaacggctcccaa
ctggtcgaagcggccggcgcgacgattgccgagatcatgcagtccagcgtgcgcaccacc
gacctgatgaaggaaattgccgcggcttccgaggaacagagcgccggcatcggccaggtc
aatacggccatcgtgcagatggaccaggtcacgcagcaaaacgcggcgctggtggaagaa
gcggcggcagccgcgcagtccatgatgcaacaggcgcaagcgctcacagcggcggtgtcg
gtcttcaagctggatgatcaggccttgcgtaccctgcccggcatgcccgccgcgccccag
ctgggccgttcactggccacgccggcgctgtcttga
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