Herbaspirillum seropedicae SmR1: Hsero_3154
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Entry
Hsero_3154 CDS
T01268
Symbol
selD
Name
(GenBank) selenophosphate synthase protein
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00450
Selenocompound metabolism
hse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Hsero_3154 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_3154 (selD)
Enzymes [BR:
hse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
Hsero_3154 (selD)
Transfer RNA biogenesis [BR:
hse03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Hsero_3154 (selD)
Prokaryotic type
Hsero_3154 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
ADJ64638
UniProt:
D8J169
LinkDB
All DBs
Position
complement(3612639..3613685)
Genome browser
AA seq
348 aa
AA seq
DB search
MSDSISAPIRLTQYSHGAGCGCKISPQVLEVILAGSGAQHLDPKLWVGNASRDDAAVYAI
DEERGVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNVLPPEV
ARDVVRGGRAACDAAGIPLAGGHSIDAPEPIFGLAVTGVVEKRHMKRNDTAIAGSLLYLT
KPLGIGILTTAEKKGKLRAEEVGAARDWMCKLNQPGSRFGKLAGVTAMTDVTGFGLLGHL
VEMCEGSGVSARIQHALVPSLPGVPYYLAEGCVPGGTGRNFESYGSKISPLSESQKHLLC
DPQTSGGLLVAVRPDANPEFLATAAALGLELAPIGELVERQRYAVEVL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactccattagcgcccccattcgcctgacccagtacagccatggcgccggttgc
ggctgcaagatctcgccccaggtgctggaggtgatcctcgcgggcagcggcgcccagcat
ctcgatcccaagctgtgggtcggcaatgcctcccgtgacgacgctgccgtctatgccatc
gatgaagaacgcggcgtggtctcgaccaccgatttcttcatgcccatcgtcgatgatccc
ttcgacttcggccgcattgccgctaccaatgccatcagcgatatctacgccatgggtggc
gatccgctcatggcgatcgccatcctcggctggccggtcaatgtgctgccgccggaagtg
gcgcgcgacgtcgtgcgcggtggtcgcgcagcctgcgatgcggccggcatcccgctggcc
ggcggccattccatcgacgcccctgaaccgatcttcggcctggccgtgaccggcgtggtc
gagaagcgtcacatgaagcgtaatgacacggccatcgctggttctctgctctatctgacc
aagccgttgggcattggcatcctcaccacggccgagaagaagggcaagctgcgtgccgaa
gaggtgggcgcggcgcgcgactggatgtgcaagctcaaccagccgggcagccgcttcggc
aagctggcaggcgtcacagcgatgaccgatgtgaccggcttcggcctgctgggccacctg
gtggagatgtgcgaaggcagcggcgtgagcgcacgcatccagcacgctctggtgcccagc
ctgccaggtgtgccctattacctggccgagggctgcgtgccgggcggcaccggacgtaat
ttcgagagctacggcagcaagatcagccccttgagcgaaagccagaagcacctgctctgc
gatccccagaccagtggcggcctgctggtcgcggtacggcccgacgccaatcccgaattc
ctcgctaccgccgccgcgctggggctggaactggcccccatcggcgaactggtggaacga
cagcgttacgccgtcgaggtgctttga
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