Herbaspirillum seropedicae SmR1: Hsero_3180
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Entry
Hsero_3180 CDS
T01268
Symbol
dppD1
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_3180 (dppD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3180 (dppD1)
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hsero_3180 (dppD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
Mg_chelatase
AAA_16
nSTAND1
AAA_5
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADJ64662
UniProt:
D8J193
LinkDB
All DBs
Position
complement(3637711..3638715)
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AA seq
334 aa
AA seq
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MSVLLDVKNLKVDLPTENGMLHAVRGIDFQVRRGEMLCLVGESGCGKSMTSLALMGLLPR
KAQCSADHILFDGVDLHGMPDKQLMQLRGKRMAMIFQEPMTSLNPSYTLGNQLCEAMLQQ
PGVSRAEARERALYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMSLMCNPDLIIADE
PTTALDVTIQAQILRMIRELQQEFGAAVIFITHDLGVVSRIADRVAVMYAGQVVETTDVA
QLFAQPRHPYTQGLLNCIPVRGKTLPGSHLQAIPGVVPSLVGQVSGCAFRNRCAKADSGC
ERDPQMVQQGSVTAPHQARCLKLDVAMDAMEVAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtattgctggacgtgaagaacctgaaggtggacctgcccaccgaaaacggcatg
ctgcacgccgtgcgcggcatcgatttccaggtgcgccggggcgagatgctgtgcctggtg
ggggagtcgggctgcggcaagtccatgacctcgctggccttgatggggctgctgccgcgc
aaggcgcagtgcagcgccgaccacatcctcttcgatggcgtcgatctgcatggcatgccc
gacaagcaattgatgcaactgcgcggcaagcgcatggcgatgatcttccaggagccgatg
acctcgctcaatccctcctatacgctgggcaaccagctgtgcgaggcgatgctgcagcag
cccggcgtgagccgcgccgaagcgcgcgagcgggcgctgtacctgttgcatcgtaccggc
atcagcaatgccgaagaccgcctgcgccagtatccgcaccagctttcgggcgggctgcgc
cagcgcgtgatgatcgccatgtcgctcatgtgcaatcccgacctgatcatcgccgatgaa
ccgaccaccgcactggacgtgaccatccaggcgcagatcctgcgcatgatccgtgagctc
cagcaggaattcggcgccgccgtcatcttcatcacccacgacctcggtgtggtctcgcgt
atcgctgaccgggtggcggtgatgtatgcgggccaggtggtggaaaccaccgacgtcgcg
caactcttcgctcagccgcgccatccttatacgcaggggctgctcaactgcatcccggtg
cgcggcaagacgctgccgggcagtcacctgcaagccattcccggtgtggtgcccagcctg
gtcggccaggtcagcggctgcgccttccgcaatcgctgcgccaaggccgacagcggttgc
gaacgtgacccgcagatggtgcagcagggcagcgtgactgccccgcaccaggcgcgttgc
ctgaaactggatgtcgcgatggatgcgatggaggtggcagcatga
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