Herbaspirillum seropedicae SmR1: Hsero_3251
Help
Entry
Hsero_3251 CDS
T01268
Symbol
fhaB
Name
(GenBank) filamentous hemagglutinin outer membrane protein
KO
K15125
filamentous hemagglutinin
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hse00536
]
Hsero_3251 (fhaB)
Glycosaminoglycan binding proteins [BR:
hse00536
]
Heparan sulfate / Heparin
Microbial pathogens
Hsero_3251 (fhaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
PT-VENN
ESPR
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
ADJ64732
UniProt:
D8J1G3
LinkDB
All DBs
Position
complement(3708437..3716494)
Genome browser
AA seq
2685 aa
AA seq
DB search
MNQLCYRIIFNKTRGLLMAVAETTRACAGKRAVGSRPGVALGGLPMARLSWIGLAVLLAT
GALVTTMPRAYAQIIADPNAPRAQQPVVVNTANGIPQVNIQTPSAAGVSRNTYSQFDVNR
AGAILNNSRSDVQTQLGGWVQRNPNLANGTARVILNEVNSSNPSMLRGFVEVAGDRAQVI
IANPSGVTCDGCGFINASRSTLTTGTPIINNGSLDGYLVRGGVVSIKGNGLNDSQSSFTD
LIARAAKINAGIWSKELKVTVGTNQVNADNTTVTAVSADPAKPQFGIDVAQLGGMYANKI
VLVGTESGVGVRNAGAIGAAAGELTLTAAGRIENSGSLAATASLGVRATGQGGDIVNSGS
VASSAAAVKLQADGGINNSNTISAQSGVTLTAASLQNSGAISAATGNVEVDTHGAVNNSG
KVQAAGDISISATQPQGNAAADISNTGNIEAAGQLGLTADGMLSNDGSITAQSIRAGVQG
LRNNGSIGTRSNAAFTLQQGLVQGANGRLSAVSDLNLTMQGDYDNAGRVQANTLTLSAAN
IGNRSGAALQAADITLTALNRLDNAGEISANRQLNITADSILNSATILGKDLVVNARTLE
NTGANALLGAGNGMSLWLTEMLANRGKAIIYSSADMAIAANGVRDANGLVNNTAQIVNED
SVIEAGGNLDIAAVNVRNTRSGVAVTTVRTLDETYAMRAPSWWHNGGNQMYYKPDSSNFN
FYEMLYVNPADVLETKSIITPDGYVIGRAVIRTHADDTVFYKGLSSNWATFGQVTRGSAT
DGTRVVYFTEQRNNVSNPDKVAGGDDPRNGRGDVNWQPMPGYSNQYGNCTTNCVRFVAEV
DYTDPNGIFRRDTQRALAPQHDSLELTRNAHHTASEDRLAAGAGAVAEIRAGGNANIRIA
QSLNNEFSNIVVSGALWLGGGNADINNLGQTLYRRHSFDGNFVTTGGTVTGYSMPDISEV
IGTTQGAIVGKQGVNIMARNFSNADIAAGSAANIRSDLTLTTGSGQSVGSVLNDASARPG
ATAPDAPVPVRPNPMFVPATSGNYLLETRTQFTDRRTWLSSDYLLTALNVDPSTTQKRLG
DGFYEQRMVREQMAQLTGRPSGSFNDDSQYQKLLNNAVSVAQSWNLRPGVALTPDQVSHL
TSDIVWLETQKVVLPDGRTEEVLVPKLYLAHIDKDALKNSGALVSGDNITIQAENISNKG
GFIDGRASGTGRTVLVASNDIANLGGGISGDEIVISAGRNVRNETLTTTQTYNNGQTSGS
YTSLSNQGSIAADKNLTITAGADITNLGATVASGRSGDAATGKLSMSAGRDINLGTVKTG
STYDANFSGYFGHAQSVSSVGSTVNAGGDLTMVAQRDLSLTAAQVAIGTNGSGNGSLMAG
RAVTIGAALDRAESTIGRAASRSYSRADDESVAVRGSNIDAAGGISIKAGLMEKADVKVA
ASSITAGKALEVAATGDINVVSEESFQSHSEYAKSTSRGLLSSTTRTSYGKRAYTNAVGS
TLSGDTTVLQAGKDMSIVGSNVVSSAGTSLVAANNITVASASDKVESAEGSNKKSSGLLS
GGGLGFTIGTRELDNKNTTVNSTAVSSNVGSIDGNVSIKAGNAYTQSGSNVLAPKGDIDV
VAKQISILAAAETERSTQDMVFKQSGLTIQITSPVLSAIQTAQQMAQAAKSTSGGRMQLL
AAANIGFAGKNAVDAVRTGQGFAVDGKDNPQVRTNALDENGDLKLGADKKPETRDATAAD
KAGGINLAISVGASKSENHSQSSASTARGSTLNAGGNISLTAQGGGADSNVIVQGSDIRS
GANTLLKADNEVRLLAAQSTTEQSSSNKAMSGSVGISIGTDGFLVNAGLSGSRGRGDGSD
VAQVNTHVDAGNKLTIASGTDTTIKGAVASGKQVVIDVGTSGSGNLNIESLQDTSTYKSR
QQSAGVSISAGMGRMSGSLNLARSSVDGNYASVNEQSGIKAGDDGFQINVAGNTDLKGAK
IASTDKAAADGKNSLTTETLTQSDIKNRSDFKAESQSVGMGTNLAGSVLGLAGSALGRGN
VSGSDSSTTRSGISQADIKITDDAAQQAKTGKTAEQTIASINADVSSERDTSGKIAKTWN
GQELQADVEAQAEITRAFGQQVAQLAGAYAESKEKELRQAASNAAQNGDQTQALLLGAEA
DQWKDGGENKRALKAITTLVIGGLGGQSAGQLLANASAPYLADAIGRYFSQPGNENKSAQ
VLSHAILGGILASANGAHAGAGALAGATGELAAEAITRELYPDAYDADGKFHPEKLNDNQ
RKTVIALSTVAGTVLAGIAGGTPLDAAIGGNISENAVTNNFLGDKTNAKRNEALAKLKKA
YNQSFLDKLVNPVKGRSESAQVLLALNYLDNRSDQLLSAYHANPDSLSSAEKNELFLYIA
YYAQQNGSAAAQFLLKAGPGSSVQPADVPELALFARQLQSIQDVHQAQAAIGSPALEVMS
GPVGDLIRLVAMAQAGYQLGTGVEELRNGDQAGLENVAVGLLSAAGTALNQAAAINPSGA
TRGRSGPIDGAGAAVNAPNTIPYQPTGSVIRQGDAPVCGPACAAMTITDNTGASVTLENV
IGSFEKGIRPSGVNTAELSDVISKAGVKNTVNLNMFPGELNRALADGKTVIVNVNNHFFI
VDSVAKVDGVLYYMTRDPSAGPRGVRASILDNAMKNSANSIVIGK
NT seq
8058 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagctttgctatcgcatcatcttcaacaagacccgtggcctgctgatggccgtg
gccgagaccacccgcgcctgcgccggcaagcgcgccgtgggcagccgcccaggcgtggcc
ctcggcggcctgcccatggcgcgcctgagctggatcggactggccgtgctgctggccaca
ggcgcgctcgtgacgacgatgccgcgcgcctatgcgcagatcatcgccgaccccaacgcg
ccgcgcgcgcaacagccggtggtggtcaataccgccaatggcattccccaggtcaacatc
cagacgccgagcgcagcgggcgtttcgcgcaatacctatagccagttcgacgtcaaccgc
gctggcgcgatcctcaacaattcccgcagcgacgtgcagacccagctgggtggatgggtc
cagcgcaatcccaacctcgccaacggcacggcgcgggtgatcctcaacgaagtcaattcc
agcaatcccagcatgttgcgcggctttgtggaagtggcgggtgaccgcgcccaggtgatc
atcgccaatccctcgggcgtgacctgcgacggctgcggtttcatcaacgccagccgcagc
accctcaccaccggcacgcccatcatcaacaatggcagcctggacggttatctggtgcgg
ggtggcgtggtgagcatcaagggtaatggcctcaatgacagccagtccagtttcaccgac
ctcatcgcccgcgccgccaagatcaatgccggcatctggagcaaggaactgaaagtcacc
gtcgggaccaaccaggtcaatgccgacaacaccacagtgaccgccgtgagcgcggacccc
gccaagccgcaattcggcatcgacgtcgcgcaactgggcgggatgtacgccaacaagatc
gtgctggtcggcaccgagtccggggtcggcgtgcgcaatgccggcgccatcggcgccgcc
gctggcgagctcacgctgacagcggcggggcgtatcgagaacagcggctccctggccgcc
acggcgtctttgggcgtccgtgcaacggggcagggtggcgatatcgtcaacagcggcagc
gttgcgtcctcggccgccgcggtcaagctccaggcagatgggggcatcaacaacagcaat
acgatcagcgcgcagagcggggtgacgctcaccgctgccagcttgcagaacagcggcgcc
atcagcgcggctaccggcaatgtcgaggtggatacgcatggtgcggtcaacaacagcggc
aaggtgcaggcggcgggcgatatctcgatcagcgcaacccagcctcagggcaacgccgcc
gcagacatcagcaataccggcaacatcgaggccgctggccagctgggtctgacagccgat
ggcatgttgagcaacgatggcagcatcaccgcgcagtccatccgcgccggggtacagggc
ttgcgcaacaacggcagcatcggcacgcgcagcaacgccgcctttacgctgcaacaagga
ttggtccagggcgccaacgggcggctcagcgcagtgagtgacctcaatctcaccatgcag
ggcgactacgacaacgcaggtcgcgtgcaagccaataccctcacgctgagcgccgccaat
atcggcaatcgcagcggcgcagcattgcaggcggcagacatcacgctcaccgcactcaat
cgcctcgacaacgccggcgagatcagtgcgaaccggcaactcaacatcaccgccgacagc
atcctcaacagcgcgaccatccttggcaaggatctcgtggtcaacgccaggacactggaa
aacaccggcgccaacgccctgctgggagcgggcaacggcatgtcgctctggctgaccgag
atgctggccaaccggggcaaggccatcatctacagcagcgccgacatggccatcgctgcc
aatggcgtgcgggacgccaatgggctggtcaacaacacggcgcagatcgtcaacgaagat
tcggtcatcgaagccggtggcaatctcgacatcgcagcggtgaacgtgcgcaacacccgc
agcggtgtggctgtcaccaccgtgcgtacgctggatgagacctatgcaatgcgggctcct
tcctggtggcacaacggcggcaatcagatgtattacaagcctgattcctccaacttcaac
ttctacgaaatgctgtatgtgaatccggccgatgtgctggagaccaagagcatcatcacc
cccgacggctacgtgatcggcagggccgtgatccgcacgcatgccgacgataccgttttc
tataaaggtctttccagtaattgggctaccttcggtcaagtcacccgaggcagtgcaacc
gacggcactcgagtggtgtatttcacggagcaacggaacaacgtcagcaaccccgacaag
gtggcaggcggcgatgatccgcgcaatggccgcggcgacgtcaattggcagcccatgccg
ggttattccaaccagtacggcaattgcaccaccaactgcgtacgcttcgtggcggaggtg
gactataccgatcccaacggcatcttccggcgcgacacgcagcgcgcattggcgccccag
catgattcgctggaactgacccgcaatgcacaccataccgccagtgaagaccggctcgcg
gcaggcgccggagcggtggcggaaattcgtgcaggcggcaatgccaatatccgcatcgcc
cagtcgctgaacaatgagttcagcaatatcgtggttagcggtgcattgtggctcggtggc
ggcaacgccgacatcaacaaccttggccagaccctgtatcgccggcacagcttcgacggc
aatttcgtcaccaccggcggcaccgtgaccggctacagcatgcccgacatctcggaagtg
atcggcaccacccaaggggccattgtcggcaagcaaggcgtcaacataatggcgcgcaat
ttcagcaatgccgacattgccgccggaagcgccgccaacatccgtagcgacttgaccctg
accaccggcagcggccagtcagtaggcagcgtgctcaatgacgccagcgcgcgccctggc
gcaacggctcccgacgcgcctgttccggtccgacccaaccccatgttcgtcccagccacc
agcggcaactacctgctggagactcgcacgcagttcaccgaccgccgcacctggctcagc
agcgactacctgctcaccgcgctcaatgtcgatccctccaccacccagaaacgcctgggc
gacggcttctacgagcagcgcatggtgcgcgagcagatggcgcaactgacgggacggccc
agtggcagctttaacgacgactcccaataccagaagctgctgaacaatgccgtgagcgtg
gcgcaaagctggaacctgcgtcctggcgtggccttgacgccggaccaggtcagccacctg
accagcgacatcgtctggctggaaacgcagaaggtcgtcctgcccgatggacgcaccgaa
gaggtcctggtgcccaagctctatctggcccatattgacaaggacgcgctcaagaacagc
ggcgccctggtcagcggcgacaacatcaccatccaggccgagaacatcagcaacaagggt
ggcttcatcgatggtcgcgccagcggcacaggccgcaccgtactggtggcgtccaacgat
atcgccaacctgggcggcggcatcagcggcgacgagatcgtgatcagcgcggggagaaac
gtgcgcaacgaaacgctcaccactacccagacctacaacaatggccagaccagcggcagc
tatacctccctgtccaaccagggcagcatcgccgccgacaagaacctgaccatcaccgcc
ggcgcagacatcaccaacctcggtgcaacggtggccagtggccgttccggagacgccgcc
accggcaagctttccatgagcgcgggccgcgatatcaatttgggtactgtcaagaccggc
agcacctatgacgccaacttcagcggttactttggtcacgcgcagagtgttagcagcgta
ggatcgaccgtcaacgcgggcggtgacctgaccatggtggcgcagcgcgatctgagcttg
actgccgcgcaggtagccatcggcaccaatggcagtggcaacggttcgttgatggcagga
cgcgccgtgacgataggcgcagcgttggacagagctgaatctacgatcggccgcgcggcc
tccaggtcatacagtagagccgatgacgagagcgtcgcggtacgaggcagcaacattgat
gccgctggcggcatcagtatcaaagcgggcctgatggagaaagccgatgtgaaggtggcc
gctagcagtatcactgctggaaaggcgctggaagtagcggccactggcgacatcaacgtc
gtctccgaagagtctttccagagtcacagcgaatacgcgaaaagcacctcacgcggcctg
ctctccagcaccacgcgcaccagctatggcaagcgcgcctacaccaacgccgtgggtagc
accctgagcggtgacacgacagtgctgcaagcgggcaaggacatgagcatcgtcggcagc
aacgtcgtatcgagcgccggaacttcgctggtggcggccaacaatattacggtcgcctcc
gccagtgacaaggtcgaatccgccgagggcagcaacaagaagagcagcggtctgttgagt
ggagggggattgggtttcaccatcggcacgcgcgagctggataataagaacaccactgtc
aacagcactgccgtatcgtccaacgtgggcagcattgatggcaatgtctcgatcaaggcg
ggcaatgcctatacgcagagcggcagcaatgtgctggcgccgaagggcgatattgatgtg
gtggccaagcagatcagtatcctggccgcggcggagaccgagcgtagcacgcaggatatg
gtcttcaagcaaagcggcttgacgatacagatcaccagcccggtgttgtcagcgattcag
acggcgcagcagatggcgcaggcggccaagagtacctcgggcggacggatgcaattgctg
gcggcggccaatatcggctttgcgggcaagaatgcagtggatgccgtccggaccggccaa
ggctttgcggtcgatggcaaagacaatccgcaagtccgcaccaatgccctcgatgaaaac
ggcgatctcaagctcggggccgacaagaagcccgagacccgcgacgccacggcagccgac
aaggccggcggcatcaacctggccatcagcgtaggcgcgagcaagagcgagaaccacagc
caatccagtgctagcactgcacgcggctccacgctcaatgcaggtggcaacatcagcctg
acggcgcagggtggtggtgcggacagcaacgtcatcgtgcagggtagcgatatcagatcg
ggagccaacacgctcctgaaagccgacaatgaagtgcgcctgctggcagcacaaagcaca
accgaacagagcagcagcaacaaggcgatgtcgggatcggtggggatctcgataggcacc
gatggcttccttgtcaatgcaggcttgtcggggagccgggggcgtggtgacgggagtgat
gttgcgcaggtcaatacgcatgttgatgcgggcaacaagctcaccattgcatcgggcacg
gataccacgatcaagggagccgtggccagcggcaagcaggtggtgatcgacgtcggcacc
agcggcagcggtaatctcaatatcgaaagcctgcaggacacgagtacctacaagagccgc
cagcaaagcgcaggggtgagtatctcggcggggatggggcggatgagcggcagtctcaac
ctggcgcgtagcagtgtggatgggaattacgccagtgtgaatgagcaatcgggcatcaag
gctggggacgatggattccagatcaatgtggcgggcaatacggacctgaagggggcgaag
attgccagcacggataaggctgctgccgatgggaagaatagcctgacgactgagaccttg
acgcaatccgatatcaagaaccggagtgacttcaaggccgagagccaaagcgtgggtatg
gggacgaatctggcaggttcggtgctgggacttgctggcagcgcgctcgggagggggaat
gtcagcggtagcgatagcagcacgacccggagcgggatcagccaggctgatatcaagatt
accgatgatgctgcccagcaggccaagacagggaagacggctgaacagaccattgcgagc
atcaatgctgatgtgagcagtgagcgtgataccagcggaaagatagctaagacgtggaat
gggcaggagctgcaggccgatgttgaagcgcaggcagagattacgcgggcttttgggcaa
caggttgctcagctagcaggcgcctatgcggagtcaaaagagaaggagctgagacaagca
gccagcaatgccgcacagaatggcgatcaaacacaggccctgctgttgggtgcagaagca
gaccaatggaaagatggcggcgagaataagcgggctcttaaagccattacgactcttgtg
attggtggcctcggtggtcagagtgctgggcaactgttagccaatgccagcgccccgtat
ctggcggatgctattggtcgctatttttctcaacctggaaacgagaacaagagtgcccag
gtattaagtcatgcaatattaggaggaatccttgcatcagctaacggcgcccatgccgga
gccggtgcacttgcaggggccacaggagagcttgccgcagaagccataacgcgcgaattg
tatccggatgcttatgatgcagacggaaaattccatccagaaaagcttaatgataatcag
cgtaaaacggttatcgcattatccacggttgccggtaccgtattggctggaattgcaggc
gggactccacttgatgcagctataggcggcaatatttccgaaaatgcggtgacgaacaat
ttccttggtgataaaaccaatgccaagcggaatgaggcgcttgccaagctaaaaaaagca
tacaatcaaagcttccttgataaattggttaatcctgtaaaaggaaggagcgaaagcgcg
caagttttgttggcgctaaattatctcgacaatcgcagcgaccaattattgagtgcatat
catgctaatccagactcattgagtagtgcggaaaagaatgaattgttcctctacatcgcg
tattacgcgcaacaaaatggatctgcagcggctcaattcctgttgaaggcggggccaggt
tcttctgtgcagccagctgacgtgcctgaactagcgctattcgcacggcagctgcaaagt
atccaggatgtacatcaggctcaagcggcaatcggttctcctgcccttgaggtgatgtcg
gggccggtcggcgacctgatcaggttggtggcgatggcgcaagcaggctatcagcttggt
actggggtggaggaactaagaaatggtgatcaagctggattagaaaatgtcgccgtgggg
ctgctgagcgcagcgggaacggctctgaatcaggcggctgctataaatccttctggagca
actagaggacggtcgggcccaattgacggcgcaggagccgctgttaacgcacctaatact
atcccgtatcaaccaacgggctcagttattcggcagggcgatgcgccagtttgtggtccg
gcttgcgctgcgatgacgattactgataatactggtgcttcagtaactttggaaaatgta
atcggcagttttgagaagggtattcgcccttcaggcgtaaacactgcagaactgtccgat
gttatcagtaaggctggtgtaaaaaacactgtgaaccttaatatgttccccggagagctg
aaccgcgcattagcagatggtaaaacagtaattgtgaatgtaaataatcattttttcatt
gttgatagtgtagcgaaggttgacggtgtactgtattacatgacacgagacccttccgca
ggaccgcgtggtgtacgtgcaagtattctggataatgcaatgaaaaatagcgcaaattca
atcgtgattggaaaataa
DBGET
integrated database retrieval system
