Herbaspirillum seropedicae SmR1: Hsero_3270
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Entry
Hsero_3270 CDS
T01268
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Hsero_3270 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hse03400
]
Hsero_3270 (mutS)
DNA repair and recombination proteins [BR:
hse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Hsero_3270 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
ADJ64751
UniProt:
D8J1W8
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Position
3745076..3747760
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AA seq
894 aa
AA seq
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MTKDLAAHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSN
GTPIKMAGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDS
DLLPEKAERCLLAMQLVPSKSRKQMQVGLSWLSMASGALKMMEFTVEAALLDGRVKQELE
RISAAEVLVADGQLEWCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLG
PAICAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANAL
APTLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALMRTDACSGLSATLAAV
PDIERITTRIALLSARPRDLAGLRAGLQQLGSLRAYVEMCGRDADASLLTQLHEDLATPV
ECLDLLERAIMLEPAAMVRDGGVIARGFDAELDELRGLSENAGQYLLDLEARERERTGIA
NLRVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSL
SREKFLYEQLLGDMGAHIVRLQAIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIE
QGRHPVVENQIERFIANDCQLAAERRLLLITGPNMGGKSIFMRQVALITLLAYVGSFVPA
TSAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATEHSLVLMDEVGRGTSTF
DGLALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAV
QSGPASQSYGLQVAQLAGVPAQVIRAARKHLSALESQSMQATPQFDLFSAPAFATPGTQD
EPDPADERSESDAVEPDPLAQALLQTLAQIDPDALTPRQALEALYQLKALQAPQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagacctcgccgcccatactccgatgatgcagcagtatctacgcatcaaagcg
gaccaccccaacacgctggtgttctaccgcatgggcgatttctatgaactgttcttcgaa
gacgccgagaaggcctcacgcctgatgggcgtcacgctcacccagcgtggttcctccaac
ggcactcccatcaagatggctggcgtgcccttccactcggtggagcaatacctggcgcgc
ctgatcaagctgggcgaatcggtggccatctgcgagcagatcggtgacccggccaccagc
aaggggccggtggagcgcaaggtggtgcgggtggtcacgccgggcacgctgaccgattcc
gacctgctgccggaaaaggccgaacgctgcctgctggccatgcaactggtgccgtcgaag
tcgcgcaagcagatgcaggtggggctgtcctggctgtccatggctagcggtgcgctgaag
atgatggaattcacggtcgaggctgcgctgctggatggccgcgtgaagcaggaactggag
cgcatctcggctgccgaagtgctggtggccgacggccagctggaatggtgcgaaccgctt
ttgcccaaccgcgccgtgaccgtgccggactggcatttcgaccagcccagcagtgaaaag
gccctgctcgaccaactgggcgtggccaccctgcacggctttggcgccgacggcctggga
ccggccatctgtgcagccggcgccctgctgcgctacgcgcaatcgacccagggacgtggc
ctgcagcacgtgcgcaccctgacggtcgaatccgagaacgaattcatcggcctggatgcc
gccacccgccgcaacctcgagctgaccgagaccatccgctcgcaggacgccaacgcgctg
gcccccaccctcttctccacactggaccattgccgcaccgccatgggctcgcgcctgctg
cgccactggctgcaccatgcgctgcgcgaccagcaggtggcgcgcgcccgtcatgccgcc
atcaacgccctgatgcgcaccgacgcctgctcgggcctgtcggccacgctggcggcggtg
cccgatatcgaacgcatcaccacccgcatcgccctgctgtcggcgcgtccgcgcgacctg
gcgggcctgcgcgccggcctgcagcaactgggctcgctgcgcgcctacgtggagatgtgc
gggcgcgacgccgacgcatcactgctgacgcagctgcacgaggacctggccacacccgtg
gaatgcctggacctgctggaacgcgccatcatgctggaaccggcggcgatggtgcgcgac
ggcggcgtgatcgcacgcggcttcgatgccgagctcgacgaactgcgcggcctgtccgag
aacgccggccagtacctgctggacctggaagcgcgcgaacgcgaacgcaccggcatcgcc
aacctgcgggtggaatacaacaaggtgcatggcttctatatcgaggtcacgcacggccag
accgacaaggtgccggaagattaccgccgccgccagaccctcaagaatgccgagcgctac
atcatccccgagctcaaggccttcgaggacaaggcgctgtcggcccaggagcgctcgctg
tcgcgcgagaagttcctctacgaacagctgctgggcgacatgggcgcgcacattgtgcgc
ctgcaggccatcgcccatgcactggcccagctcgacaccctggtggcgctggccgaccat
gccgtgcgcaacaactggtgcgcgccgcaactggtcgatgagccctgcatccagatcgaa
cagggccgccacccggtggtggaaaaccagatcgagcgtttcatcgccaacgattgccag
ctggccgccgagcgccgcctgttgctcatcaccggccccaacatggggggtaaatcgatc
ttcatgcggcaggtggcgctgatcacgctgctagcctatgtgggcagcttcgtgccggcc
accagcgccgtgatcgggccggtggaccgcatcttcacccggatcggcgcggccgacgac
ctggccggcgggcggtcgaccttcatggtggaaatgaccgaatcggccgccatcctcaac
aatgccaccgaacattcgctggtgctcatggatgaggtcgggcgcggcacttccaccttc
gacgggctggccctggcctgggccattgccaagcatctgatcgacgtcacgcgcagcttc
acgctctttgccacccactacttcgaactgacgcagttgcccgagatccatccgacggcg
gccaacgtgcatctctcggcagtggaacacaaggacagcatcgtcttcctgcacgcggta
cagagcggcccggcctcgcagagctatggcctgcaggtggcgcagctggcgggcgtaccg
gcgcaggtcatccgcgccgcgcgcaagcatctctcggcgctggaaagccagtccatgcag
gccacgccgcagttcgacctgttcagcgccccggcattcgccacacccgggacacaggat
gagccggacccagccgatgaacgcagtgagtccgatgcggtcgaacccgatccgctggcg
caggcgctgctgcagacgctggcgcagatcgaccccgatgcgcttacaccgcgccaggcg
ctggaggccttgtatcagctgaaggccttgcaagcgccgcagtga
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