Herbaspirillum seropedicae SmR1: Hsero_3275
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Entry
Hsero_3275 CDS
T01268
Name
(GenBank) transmembrane lipoprotein
KO
K07287
outer membrane protein assembly factor BamC
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3275
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_3275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lipoprotein_18
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
ADJ64756
UniProt:
D8J1X3
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All DBs
Position
complement(3752565..3753746)
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AA seq
393 aa
AA seq
DB search
MTNSKNVRPVVRSAATLTQRSIVVALALAGLAGCSSVGNLLDGDRIDYKSAEKARGPRLE
VPPDLTQLQRDNRYAIPEANKGVATASGYQLEQQTRPANEITSVAPAAKGDEIRIERDGS
QRWLVVKQTPEQLWPQIKDFWQDSGFLINIESPDTGVMETDWAENRAKIPQDFVRNTLGK
VFDSLYSTGERDKFRTRLERGPNGTTEIFISHRGAEEVLTGSAKETSVWTARPSDPGLEA
EFLSRLMVRLGAEETKAKAAVANAPSLQARSRLQKTAAGTSVQVDEGFERAWRRVGLALD
RVGFTVEDRDRSQGIYYVRYVDQNQDAKDKKDEGFFSRIFSSKDKDKKAAKYRIVVKGAG
SDSSNIVVQNGEGGPDTSGISDKILGLLNEQLK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgactaatagcaagaacgttcgtccggttgtccgctcggcggccacacttacccaacgc
agcattgtcgtcgcactggcgctggccggcctggcaggatgctcgtccgtcggcaacctg
ctcgacggcgaccgtatcgattacaagagtgcggaaaaagcccgcggcccgcgtctggaa
gtgccgcccgacctgacccagctgcagcgcgacaaccgctacgccattccggaagccaac
aagggcgtggcgaccgcgtcgggctatcagctggaacagcagacccgtccggccaacgaa
atcacttcggtggccccggcagccaagggcgacgagatccgcatcgagcgcgatggctcg
cagcgctggctggtggtcaagcagactcccgagcagctgtggccgcagatcaaggatttc
tggcaggacagcggtttcctgatcaacatcgaatcgcccgacaccggcgtgatggaaacc
gactgggccgagaaccgcgccaagatcccccaggacttcgtgcgcaacacgctgggcaag
gtgttcgattcgctgtactccaccggcgagcgtgacaagttccgcacccgcctggagcgc
ggccccaacggcaccaccgagatcttcatcagccatcgcggcgccgaagaagtgctgacc
ggttcggccaaggaaacctcggtgtggaccgcgcgtccttccgacccgggcctggaagcc
gaattcctgtcgcgcctgatggtgcgcctgggcgccgaggaaaccaaggccaaggccgcc
gtggccaatgcgccctcgctgcaggcccgttcgcgcctgcagaagaccgctgccggcacc
agcgtgcaagtggatgaaggcttcgaacgcgcatggcgtcgcgtcggcctggcgctggat
cgcgtcggcttcaccgtcgaagaccgcgaccgcagccagggcatctactacgtccgctac
gtggaccagaaccaggacgccaaggacaagaaggacgagggcttcttctcgcgcatcttc
agctccaaggacaaggacaagaaggccgccaagtaccgcatcgtggtcaagggcgctggc
agtgacagcagcaacatcgtcgtgcagaacggcgagggcggtccggatacctcgggcatc
tccgacaagatcctgggcctgctcaacgagcagctgaagtaa
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