Herbaspirillum seropedicae SmR1: Hsero_3338
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Entry
Hsero_3338 CDS
T01268
Name
(GenBank) ABC-type sugar transport system, periplasmic component protein
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3338
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
Hsero_3338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
TAT_signal
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
ADJ64819
UniProt:
D8J236
LinkDB
All DBs
Position
3828268..3829599
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AA seq
443 aa
AA seq
DB search
MSKLTRREFLVTSAAAAAATGMGANAFAAGPGAAGADSIKYPIEQGATLRVLRWKRFVQG
DEDLWNANIKKFTELTGVAVRTDSEGWEDVRPKSAVAANVGSGPDIVLGWFDDPQQYPTK
LVDMTDLADSLGKRYGGWYDVCRKYGTKDGKWIALPLGVIGNALVYRESQIKAAGFDAIP
KDTAGFLKLCQALKAKDTPVGFALGKAVGDANNWAHWLLWSHGGKLVDKSGKVAINSPET
RAALEYAKQLYATFVPGTLSWQDPSNNKAYLDGQISMTANGISVYYAAKNSPDPKLQEIG
KDTLHAHFPIGPVGKPSELMQITQMMVFKHTKYPNAAKAFVQFMFEPDQYNPWMKASIGY
VSQSLKAYEKNPIWTEDPKATVYRDSASLMLDHGHEGPLGQASAACMADYVVVDMVAEAA
SGAKTVQQAIDRAADRAKRYYKA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctgacacgacgcgaattcctggtgaccagcgccgccgccgccgcggctacc
ggcatgggcgcgaacgcctttgccgcaggaccgggcgcggctggcgccgacagcatcaag
taccccatcgagcagggcgccaccctgcgcgtgctgcgctggaagcgtttcgtccagggc
gatgaagacctgtggaacgccaacatcaagaagttcaccgaactgaccggcgtggccgtg
cgcaccgacagcgaaggctgggaagacgtgcgtcccaagtcggccgtggcggccaacgtg
ggcagcggtccggacatcgtgctgggctggttcgacgacccgcagcaatatcccaccaag
ctggtcgacatgaccgacctggccgattcgctgggcaagcgctatggcggctggtacgac
gtctgccgcaagtacggcaccaaggacggcaagtggatcgccctgccgctgggcgtgatc
ggcaatgccctggtctatcgcgaaagccagatcaaggcggccggcttcgacgccattccc
aaggacacggccggcttcctcaagctgtgccaggccctcaaggccaaggacacgccggtc
ggcttcgccctgggcaaggccgtgggcgacgccaacaactgggcgcactggctgttgtgg
tcgcacggcggcaagctggtcgacaagagcggcaaggtcgccatcaattcgcccgagacc
cgcgcggcgctggaatacgccaagcagctctacgccaccttcgtgcccggcaccctgtcc
tggcaagacccgtccaacaacaaggcctacctggacggccagatcagcatgaccgccaac
ggcatctcggtctactacgccgccaagaactcgccggaccccaagctgcaggagatcggc
aaggacaccctgcacgcgcacttccccatcggtccggtgggcaagccttcggagctgatg
cagatcacccagatgatggtcttcaagcacaccaagtatcccaatgcggccaaggccttc
gtgcagttcatgttcgagccggatcagtacaacccgtggatgaaggcttccatcggctac
gtcagccagtcgctgaaagcctatgagaagaacccgatctggaccgaagaccccaaggcc
acggtctaccgcgactcggcctcgctgatgctggaccatggccacgaaggtccgctggga
caagcctcggcagcctgcatggccgactacgtggtggtggacatggtggccgaggcggcc
tcgggcgccaagaccgtgcagcaggccatcgaccgcgcagccgatcgcgccaagcgctac
tacaaggcttga
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