Herbaspirillum seropedicae SmR1: Hsero_3358
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Entry
Hsero_3358 CDS
T01268
Symbol
dctB
Name
(GenBank) C4-dicarboxylate transport sensor kinase transcription regulator protein
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_3358 (dctB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hse01001
]
Hsero_3358 (dctB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hse02022
]
Hsero_3358 (dctB)
Enzymes [BR:
hse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Hsero_3358 (dctB)
Protein kinases [BR:
hse01001
]
Histidine kinases
NtrC family
Hsero_3358 (dctB)
Two-component system [BR:
hse02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
Hsero_3358 (dctB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
dCache_1
HisKA
HATPase_c_5
DUF7549
ECM11
HATPase_c_2
LMP
SIT
Motif
Other DBs
NCBI-ProteinID:
ADJ64839
UniProt:
D8J256
LinkDB
All DBs
Position
complement(3847686..3849488)
Genome browser
AA seq
600 aa
AA seq
DB search
MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA
LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD
EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM
VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA
DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMLAL
AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE
SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL
EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR
AAACVTGDVVRTEQVLVNLLRNALDAVEEAEHKRIAVVLEVAGGYALVRIRDSGGGIADE
VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKMET
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcccgacgaaacctgctcatcctgaccttgttcctggtcgccaccctgctggtg
tgcgggatcacctatcgtctggcgctacgcaaggccgaggtggaccagaagacccagggc
gcggcgcaattgcagatcgctgccctggacctggagtccatcttgcagaaatacgaggcc
ttgcccttcgccctgggtttccaggccgatgtgcggcaggtcttgcagcatccggacgat
gtgctggcggtagatcgtctcaatcgcgccttcaagaccatccagcagcaatcgcaggca
gtcagcatcttcatgctcgaccggcgcgggctgaccctggcctccagcaactgggacgat
gaattcagcttcgtaggccgcgacttcggtttccgcccctatttcagcgaggctgtgcag
gggcgggcagggcgcttctatggcatcggcaatatctccagcgaaccgggctatttcatc
gcccagcccatctatcgccgccaggaccaggccgaaggcgacctgcccatcggcgtcatg
gtggtgaaggtggacctggccgagttcgagcacacctggcgcagcagcgccgatccgatc
accctcaccgatgccggcggcgtggtgttcctgagcaaccggcccgagtggaaataccac
agcctgcaggccctgagcccgccgatgcagcaggcgctggccgggacgcaccagtatgcc
gacctgcccatcacgccggtgtcggcgctgccgccggccttgcagagcggctttggcagc
catgtctcgcgcccggtggggcggctggggtggcagctgatgctgtttccctcgcaggcg
cgcatgcagcgcacggccatgctctggaccatggcctgtgcgctgctgatgttggcgctc
gccatttccttgctggcctggtaccagcaccgccgccgtctggaagagaggatggcgtcc
cgcgacgccttgcgccgcgccgccgctgagctggagcagcgcattgccgagcgcaccggc
caactgacggcggcaaaccaggcgctggaagcccgctacgagaaactgcagcagaccgag
tcgctgctgcgcaccacccagaatgaactggtgcaggccggcaagctggccatgctgggg
cagatggctgctggcgtcacgcatgagctgaaccagccattgacggccattcgcgccttt
gccgacaatgcggtgaaattcctggcgcgcgggcaaagcgcccaggccgtcgagaacctg
gagtacatcagcagcgccagcgccaccatgggcaagatcatcgcccagttgaagggattt
gcgcgcaagagcggcgaggccgtggcctgtgtcgatctcagccaggccatcgaggcgtcc
agcctgctgctggccagcgaatgccagaagctgggtgcgacgatcagcatcgacatccgc
gctgccgcctgtgtgaccggcgacgtggtgcgcacggagcaagtgctcgtcaatctgctg
cgcaatgcgctggatgcggtggaagaggccgagcacaagcgcattgcggtcgtgctggaa
gtcgcgggcggatatgcactggtgcgcatccgcgactcgggcggcggcatcgctgacgag
gtcgcaccccacctgttcgaacctttctttaccaccaagtcctccagcaagggactgggc
ctgggactggccatttcatcgtccatcgtgcaggcgatgaacggccagttgagcgcacac
aatcatgaagagggcggcgccgagttcgtggtgcggttgccgctgttgaagatggagacc
tga
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