Herbaspirillum seropedicae SmR1: Hsero_3558
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Entry
Hsero_3558 CDS
T01268
Symbol
mscS
Name
(GenBank) small-conductance mechanosensitive channel protein
KO
K03442
small conductance mechanosensitive channel
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3558 (mscS)
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_3558 (mscS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st_1
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
ADJ65037
UniProt:
D8IQC5
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All DBs
Position
4081387..4082217
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AA seq
276 aa
AA seq
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MSDHLLNFDTLINLYLVPFGLKVIAAIVIWIVGGMFINTLSRIVRRVLTARQFETTLINY
ASSAIHVILRVLLVMGILEVCGIPTTSFAAMIGAVGVALGVAWSGLLSNFAAGIFLVVLR
PFKVGDYITAAGQTGTVSDIGLVTTIITTDNNLRVIIGNNKLFSENIINYNVNATRRTDL
RCQIAYSVDPQQAIAKLSERIKAIPNVLQTPAPGIVIQEFNATGTLIALRVHAPTPNFGQ
VYNDVQNAIAEVCLKEGWPAPATYQVAVPLAQPPQS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccatctgctcaacttcgacaccctcatcaatctctacctggtccccttcggc
ctgaaggtgatcgccgccatcgtcatctggatcgtcggcggcatgttcatcaataccctc
tcgcggatcgtgcgccgcgtgctgactgcgcgccagttcgagaccaccctgatcaactac
gccagctcggccatccacgtgatcctgcgcgtgctgctggtgatgggcatcctggaagtg
tgcggcatccccaccacctcctttgccgccatgatcggcgcggtcggcgtggcgctgggc
gtggcctggtcgggcctgctgtcgaacttcgccgccggtatcttcctggtggtgctgcgc
cccttcaaggtgggcgactacatcaccgccgccggccagactggcaccgtctccgatatc
ggcctggtgaccaccatcatcaccaccgacaacaacctgcgcgtgatcatcggcaacaac
aagctgttctcggaaaacatcatcaactacaacgtcaacgccacccgccgcaccgacctg
cgttgccagattgcctacagcgtcgatccacagcaggccatcgccaagctcagcgagcgc
atcaaggccatccccaatgtgttgcagacgccggcgccgggcatcgtgatccaggaattc
aatgccaccggcaccctgatcgccctgcgcgtccacgctcccacgcccaatttcggccag
gtctacaacgacgtgcagaacgccatcgccgaggtctgcctcaaggaaggctggccggcc
cccgccacctaccaggtcgcggtgccgctggcgcaaccgccgcaaagctga
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