Herbaspirillum seropedicae SmR1: Hsero_3565
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Entry
Hsero_3565 CDS
T01268
Symbol
rfaL
Name
(GenBank) Lipid A core - O-antigen ligase protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00540
Lipopolysaccharide biosynthesis
hse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Hsero_3565 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Hsero_3565 (rfaL)
Enzymes [BR:
hse01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
Hsero_3565 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Core region
Hsero_3565 (rfaL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ADJ65044
UniProt:
D8IQD2
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All DBs
Position
4087458..4088738
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AA seq
426 aa
AA seq
DB search
MHYNAHFAAQAGHAPLPSMPFYSSLAVFLLVALSLVVPSGFSLGSLMLMLGAAVLLRKGK
PRAILYREDWLIMLALLSYFFVNAGLNLVHQAPGREYDAPLRFLLAIPALLLLRAYPPRP
GALWTGAAIGAVGAGLLSLWQWLADGAARPGGSTNPIQYGNIAALLAILAACGLARAIRL
QQPLRWKLMHAAGLILGLTASILSGSRGSWLALPVCATLAAWLLLRAGYARLVLQLGAGS
LAMLVCLALLPQSPLSARLRLALAETNDYVQRADADSSVGTRLEMWRIGMQLAPQHLLVG
WGKQGMIDAKHEMVSQGQASPSVDEHTHLHNEYLDALVKRGIPGLAALLVLYLLPLWLFH
RQRRLAAGYEARLAASAGVMMVLSYLAFGLTQAFLTHNNGVMLYAFLCSILWALCQEQAV
HPANTA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcattacaatgcgcactttgccgctcaagccggtcacgcgccattgccttccatgcct
ttctacagctctctcgccgttttcctcctcgtggcactctctctggtcgtccccagcgga
ttctcgctggggtccctcatgctgatgctcggcgcagcagtcctgctacgcaagggcaag
ccacgcgcgattctgtatcgcgaagactggctcatcatgctggcgctgctaagttatttc
ttcgtcaatgccgggctgaacctggtacatcaagcacctgggcgtgaatatgatgccccg
ctgcgctttctcctggccatcccggcgctgttgctgctaagggcctacccgccgcgtccg
ggcgcgttatggacaggcgcggccatcggagcggtcggggcaggcttgctgagcctctgg
cagtggctggccgatggcgccgccaggcctggtggcagtaccaatcccatccagtacggc
aacattgccgccctgctggccatcttggcagcatgtggcctggcgcgcgccatccggctc
caacaaccgttgcgctggaagctaatgcatgcggcgggcctgatcctaggattgacagcg
agtattctcagcggcagccgtggcagttggctcgccttgccagtctgcgctaccctggcg
gcttggctgctcctgcgtgccggttatgctcgcctggtgctgcagttgggcgccggttcg
ctggcgatgctggtctgcctggcgttgctgccgcagtcccccttgtccgctcgcctgcga
ctggcactggcggagaccaacgactatgtccagcgggccgacgcagactcatccgtgggt
acccgcctggaaatgtggcgtatcggcatgcaattggcgccccaacacttgctggtcggg
tggggcaagcagggcatgatcgacgccaagcacgagatggtaagccaaggccaggcctcc
ccctcggtggatgaacacacccacctgcacaatgaatacctggatgcactggtcaagcgc
gggattcccggcttggccgccctgctggtcctgtatctgctgccgctgtggctgtttcac
cgacagcggcgccttgcagcggggtatgaagcccgcctggcggctagcgccggggtcatg
atggtgctgtcctatctggcctttggcctgacgcaggcgttcctgacacacaacaacggg
gtgatgctgtacgccttcctgtgttcaatcttgtgggccctgtgccaggaacaggccgtc
catccggcgaacacggcataa
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