Herbaspirillum seropedicae SmR1: Hsero_3570
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Entry
Hsero_3570 CDS
T01268
Name
(GenBank) Lipid A core - O-antigen ligase protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00540
Lipopolysaccharide biosynthesis
hse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Hsero_3570
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Hsero_3570
Enzymes [BR:
hse01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
Hsero_3570
Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Core region
Hsero_3570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ADJ65049
UniProt:
D8IQD7
LinkDB
All DBs
Position
complement(4093649..4094857)
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AA seq
402 aa
AA seq
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MGSFTSFSVFLFSAISLIVPSGFSVGSVLLALGSLTLVNKSVRTTLNREDRLILAVLLAY
FAVTVAMLLLHHESGKEYDLPLRFFLAAAALLLLRAYPPAPAAFWSGLILGGIGAGVFAG
WQYFAHNVRATGYTNAIQYGDISFIIGILCLTGITWAMQQRAARAWVALLIVGGVMGLMG
SLFTGSRGSWVALPICLLILCVYYSRSIPARYVWGSLAALVAAIAIVFTVMPSTDFRARI
SLAFSEASTYMQKKDADSSIGTRMEMWRAGAMAVAEAPVLGMGKAGFVQWETGQIEAGKI
NALMSGNNHVYNEWLDALVKRGVPGLLVLLALYFVPLRLFIARLKSAPEQAKPYALGGVL
LIVNYIGFGFSQVFLAHNSGVMTLGFTMVILWGMLRGEESRS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcttcacttcgttctcggtttttctcttttcggccatttccctgattgttccc
agtggtttttcggtcggttcggtgctgctggcgttgggtagcctcaccttggtcaacaag
tcggtgcgcaccaccctgaatcgtgaggacaggctgatcctcgccgtgctgctggcctac
ttcgccgtcaccgttgccatgctgctgctgcaccacgagagcggcaaggaatatgacctg
ccgctgcgcttcttcctggcggcagccgccttgctgctgctgcgcgcctatccgcccgca
ccagcggccttctggtcgggcctgatcctgggcggcatcggcgcgggcgtgttcgcaggc
tggcagtattttgcccacaacgtgcgcgccacgggctacaccaacgccatccagtacggc
gacatcagcttcatcatcggcatcctgtgcctgaccggcatcacctgggcgatgcaacaa
cgggccgcgcgggcgtgggtggcgctgttgatcgtgggcggcgtcatgggcctgatgggt
tccctcttcactggcagccgcggcagctgggtggccttgccgatctgcttgctcatcctt
tgcgtgtactacagccgctccattcccgcgcgttatgtctggggcagcctggccgcgctg
gtggcggccatcgccatcgtctttaccgtcatgccgagcacggacttccgcgcgcggata
tcgctggccttttccgaagcctcgacctacatgcagaagaaggatgccgacagctccatc
ggcacgcgcatggaaatgtggcgcgctggcgccatggcggtggctgaagcgccagtgctg
gggatgggcaaggcgggtttcgtgcagtgggagaccggccagatcgaagccggcaagatc
aacgccctcatgtctggcaacaaccacgtctacaacgaatggctggacgccctggtcaag
cgcggcgtccctggtctgctggtcctgctggccctgtatttcgtgccgttgaggctgttc
atcgcgcgcctgaagtctgcgcctgagcaagccaagccctatgccctgggtggcgtcctg
ctcatcgtcaactacatcggtttcggtttttcccaggtgttcctggcccataactcggga
gtgatgaccctgggcttcaccatggtcatcctgtggggcatgctgcgcggggaagagtcg
cgcagttga
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