Herbaspirillum seropedicae SmR1: Hsero_3605
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Entry
Hsero_3605 CDS
T01268
Symbol
nusA
Name
(GenBank) transcription elongation factor protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hse03021
]
Hsero_3605 (nusA)
03009 Ribosome biogenesis [BR:
hse03009
]
Hsero_3605 (nusA)
Transcription machinery [BR:
hse03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Hsero_3605 (nusA)
Ribosome biogenesis [BR:
hse03009
]
Prokaryotic type
rRNA transcription factors
Hsero_3605 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ADJ65083
UniProt:
D8IQH1
LinkDB
All DBs
Position
complement(4134435..4135994)
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AA seq
519 aa
AA seq
DB search
MSREILLLVDALAREKNVDKEVVFGALEHALAQATKKRYEGEVDIRVSIDRESGEFESFR
RWHVVPDEAGLQLPDQEVLLFEAKEQFPDIEVDEYIEDPIESVEFGRRFAQDTKQVVLQR
IRDAEREQILADFLARGDALVTGTIKRMERGDAIIESGKIEARLPRDQMIPKENLRIGDR
VRAYILRVDRSARGPQVILSRTAPEFIMKLFELEVPEIEQGSLEIKSAARDPGVRAKIAV
YTADKRIDPIGTCVGMRGSRVQAVTGELGGERVDIVLWSEDPAQFVIGALAPANVTSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLAAELTRWQINIMTAEESADKSAAETALIRTL
FMEKLDVDQEVADILVEEGFSTLEEIAYVPINEMLEIESFDEETVNELRNRARDALVTEA
IASEEGLEGMEEELINFEGLDRVLAGKLGLAGVKTLPAFAGLAYDEFGAILALPSERARQ
LIENAFEDVTDDEMKLIDSKYDERAKALQAKAWSAVEGR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgaaattttgttgttggtcgatgcgctggcgcgcgaaaagaacgtcgataag
gaagtcgtcttcggcgccctggagcatgcgctcgcgcaggctaccaagaagcgctatgaa
ggcgaggtcgacattcgcgtctcgatcgaccgtgaaagcggcgagttcgaatccttccgc
cgctggcacgtggtgcccgacgaggccggcctgcagctgcccgaccaagaagtgctgctg
ttcgaagccaaggaacagttccccgatatcgaagtcgatgagtacatcgaagatccgatc
gaatccgtcgagttcggccgccgtttcgcccaggacaccaagcaggtcgtcctgcagcgc
atccgcgacgccgagcgcgagcagatcctggcggatttcctggcccgtggcgacgccctg
gtgaccggtaccatcaagcgcatggagcgcggtgacgccatcatcgaatccggcaagatc
gaagcccgcctgccgcgcgaccagatgatccccaaggaaaacctgcgcatcggcgaccgc
gtccgcgcctacatcctgcgcgtggaccgcagcgcccgtggtcctcaggtgatcctgtcg
cgcaccgcgccggaattcatcatgaagctgttcgagctggaagtgccggaaatcgaacaa
ggctcgctggaaatcaagtcggccgcccgcgacccgggcgtgcgcgccaagatcgccgtc
tacaccgccgacaagcgcatcgaccccatcgggacctgcgtgggcatgcgcggttcgcgc
gtgcaggccgtgaccggcgaactgggtggcgagcgcgtggacatcgtgctgtggtcggaa
gacccggcgcagttcgtcatcggcgcgctggccccggccaacgtcacctccatcgtggtc
gatgaagaaaagcacgccatggacgtggtggtggatgaagagaacctcgccatcgccatc
ggccgtggcggccagaacgtgcgtctggcagccgaactgacgcgctggcagatcaacatc
atgacggccgaggaatcggccgacaagtcggcggccgagaccgcgctgatccgtacgctg
ttcatggaaaagctcgatgttgaccaggaagtggccgacatcctggtcgaggaaggtttc
tcgaccctggaagaaatcgcctacgtgccgatcaacgagatgctcgagatcgaatcgttc
gacgaagagaccgtcaatgagctgcgcaaccgcgcccgcgacgccctggtgaccgaagcg
atcgcctccgaagaaggcctggaaggcatggaagaggagctgatcaacttcgaaggcctg
gaccgtgtgctggccggcaagctgggcctggctggcgtgaagacgctgccggccttcgcc
ggcctggcttatgacgaattcggcgcgatcctggccctgccttccgagcgcgcgcgccaa
ctgattgaaaatgcatttgaagatgtgaccgacgatgaaatgaagctcatcgattccaaa
tacgatgagcgcgccaaggccctgcaggccaaggcatggagcgctgtcgaaggccgctga
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