KEGG   Herbaspirillum seropedicae SmR1: Hsero_3654
Entry
Hsero_3654        CDS       T01268                                 
Symbol
ribD
Name
(GenBank) bifunctional enzyme: diaminohydroxyphosphoribosyl aminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase protein
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse00740  Riboflavin metabolism
hse01100  Metabolic pathways
hse01110  Biosynthesis of secondary metabolites
hse01240  Biosynthesis of cofactors
hse02024  Quorum sensing
Module
hse_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:hse00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Hsero_3654 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hsero_3654 (ribD)
Enzymes [BR:hse01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Hsero_3654 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Hsero_3654 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Med26_C UPF0257
Other DBs
NCBI-ProteinID: ADJ65132
UniProt: D8IQM0
LinkDB
Position
4186588..4187652
AA seq 354 aa
MALALIQAGFGMLDTTPNPRVGCVIVKDQRIIGAGFTQPPGGNHAEIQAMADAAARGHDV
RGATVYVTLEPCSHFGRTPPCADALIRAGVARVVAAIADPNPMVAGQGLARLQAAGIEVS
CGLLEEEARDINIGFLHRMRTGRPWVRMKSAASLDGKTALHNGVSQWITGQAARDDGHIW
RARACAIMAGIGTIQKDDAQLTVRAIETPRQPRRIVIDSKLIVSPEARVIQGGNTWVFTA
TDDRDKRAALEAEGAEVILLANEQGKVDLPGLMRELGQRQINELHVEAGARLNGALLREG
CVDELLVYLAPSLIGDGRNMFELPPLEDLSGKIGIRFHEVKQVGADLRILARFE
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggcgctggccctgatccaggccggcttcggcatgctcgacaccacgcccaatccgcgt
gtgggctgcgtcatcgtcaaggaccagcgcatcatcggcgccggcttcacccagccgccc
ggcggcaaccacgccgagatccaggccatggccgacgccgccgcgcgtggccacgacgtg
cgcggcgcgaccgtctacgtcaccctggaaccctgcagccacttcggccgcaccccaccc
tgcgccgacgccctcatccgtgccggcgtagcgcgggtggtcgcggccatcgccgacccc
aaccccatggtggccggacagggcctggcgcgcctgcaggccgccggcatcgaggtcagc
tgcggcctgctggaagaagaagcgcgcgacatcaatatcggcttcctgcaccgcatgcgc
accggccgcccctgggtacgcatgaagagcgccgccagcctggacggcaagaccgccttg
cacaatggcgtgagccagtggatcaccggccaggccgcccgtgacgacggccacatctgg
cgcgcccgcgcctgcgccatcatggccggcatcggcaccatccagaaggacgacgcgcaa
ctgaccgtacgcgccatcgagaccccgcgccagccgcgccgcatcgtcatcgacagcaag
ctcatcgtttcacccgaggcgcgggtgatccagggcggcaacacctgggtcttcaccgcc
actgacgaccgcgacaagcgcgccgccctcgaagccgagggcgccgaggtgatcctgctg
gccaatgagcagggcaaggtcgacctgcccggcctgatgcgcgaactaggccagcgccag
atcaatgaattgcacgtggaagccggcgcccggctcaatggcgcattgctgcgcgaaggc
tgcgtggatgaactgctggtctacctggcgccgtccctgatcggcgacggccgcaacatg
ttcgagctgccgccgctggaagacctgtcgggcaagatcggcatccgtttccatgaggtc
aagcaggtcggggcggatttgcgtatccttgctcgtttcgaatga

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