Herbaspirillum seropedicae SmR1: Hsero_3661
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Entry
Hsero_3661 CDS
T01268
Name
(GenBank) ABC-type amino acid transport system, periplasmic component protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_3661
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_3661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3661
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_3661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ADJ65139
UniProt:
D8IR13
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All DBs
Position
complement(4192657..4193835)
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AA seq
392 aa
AA seq
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MNRLSKVAGAVMMAMAVGASLPAQAADVVKVGFLTTLSGPASAPGVDEREGFMLALKTLG
NKLGGVPAEVIVVDDQFSPDAAKQGADRLIKREKVDILSGFVYSNILLAVAPAAFASKTV
VVSANAGPAQLAGAGCNPYFFSASYQNDAAHEAAGKLMADKGYQRVAIIAPNYPAGKDAS
AGFKRFLKKDPAVELFPKLGQLDFATEIAQLRAANIDALYFFLPGGMGVNFVKQYAAAGM
DPKIVRVMPAYDADQQMLSNGDLIAGVANTGQWSSDLPNEQNRAFVAAYLKEYGRQPSMF
ASQAYDAAMLIDSAVKAVGGKVENREALIAAIKTANFKSVRGGFRFAANHFPIQNQYARV
VTKGADGKYVNNMTQTVLTDHVDAYVGQCKMP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgactgagcaaagtggcaggtgcggtaatgatggcgatggcggtgggcgcaagc
ctgcccgcccaggcggccgatgtggtgaaggtgggcttcctgaccacgctgagtggtccg
gccagcgcgccgggcgtggatgaacgcgagggcttcatgctggccttgaagaccctgggt
aacaagctcggcggcgtgcctgccgaagtcatcgtggtggacgaccagttcagtcccgac
gccgccaagcagggcgcggaccgtctcatcaagcgcgagaaggtcgatatcctgagcggc
ttcgtctactccaacatcctgctggccgtggcgcctgccgctttcgccagcaagaccgtg
gtggtcagcgccaacgccggtccggcacaactggccggtgcgggctgcaacccgtatttc
ttcagcgccagctaccagaacgacgccgctcatgaagcggctggcaagctcatggccgac
aagggctaccagcgcgtggccatcatcgcccccaattatccggcgggcaaggatgcttcg
gctggcttcaagcgcttcctgaagaaagatcccgccgtcgaactcttccccaagcttggt
cagctcgatttcgccaccgagatcgcccagctgcgcgccgccaatatcgatgccctgtat
ttcttcctgccgggtggcatgggggtgaatttcgtgaagcaatatgcggccgccggcatg
gaccccaagatcgtgcgcgtgatgcccgcctatgacgccgaccagcagatgctctccaac
ggcgacctcatcgctggcgtggccaataccggccagtggtccagtgacctgcccaatgag
cagaaccgcgccttcgtggcggcctacctcaaggaatatggtcgtcagccctcgatgttt
gcctcccaggcctatgacgcggccatgctcatcgatagcgccgtcaaggccgtcggcggc
aaggtcgagaaccgcgaagccctgatcgcggcgatcaagacggccaacttcaagtcggtg
cgcggtgggttcaggtttgcggccaaccatttcccgatccagaaccagtatgcccgggta
gtgaccaagggcgccgacggcaagtacgtcaacaacatgacgcagacggtgctgacggac
cacgtcgatgcctatgtcggccaatgcaagatgccatga
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