Herbaspirillum seropedicae SmR1: Hsero_3689
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Entry
Hsero_3689 CDS
T01268
Symbol
rpsA
Name
(GenBank) 30s ribosomal subunit S1 protein
KO
K02945
small subunit ribosomal protein S1
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Hsero_3689 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hse03011
]
Hsero_3689 (rpsA)
Ribosome [BR:
hse03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Hsero_3689 (rpsA)
Bacteria
Hsero_3689 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ADJ65167
UniProt:
D8IR41
LinkDB
All DBs
Position
complement(4222470..4224227)
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AA seq
585 aa
AA seq
DB search
MHHTDTGQSFLLSFMSTTTVIAAGVDTSSEFAALFEESLSRQDMRSGEVISAEVVRLDHN
FVIVNAGLKSEAFIPVEEFKNDNGEVEVNVGDFISVAIESLENGFGDTILSRDKAKRLAS
WLSLEKAMESGEIVTGTVNGKVKGGLTVLTNGIRAFLPGSLVDTRPVKDTTPFEGKTLEF
KVIKLDRKRNNVVLSRRAVIEASMGEERAKLMETLKEGTVVTGIVKNITDYGAFVDLGGI
DGLLHITDLAWRRVRHPSEVLSVGQEITAKVLKYDQEKNRVSLGVKQLGDDPWTGLSRRY
PQGTRLFGKVTNLTDYGAFVEVEQGIEGLVHVSEMDWTNKNVAPNKVVQLGDEVEVMVLE
IDEERRRISLGMKQCKPNPWDDFAMSHKKGDKVKGSIKSITDFGVFIGLPGNIDGLVHLS
DLSWTEAGEEAVRKFKKGDELEAVVLAIDVERERVSLGVKQLEGDPFNNFAALNDKGAIV
TGTVKSVEPKGAVIQLTDEVEGYLRASEISRDRVEDAGTHLKVGDSVEALVINIDRKARS
IQLSIKAKDNAETQEAMQKMSADSNAASGTTSLGALLKAKLDNKN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcacacggataccggccaatctttcttactttcttttatgtctaccactaccgtt
atcgctgcaggtgttgatacctccagcgaatttgctgctctgttcgaagaatcgctgtcg
cgtcaggacatgcgttcgggtgaagtcatctcggcagaagtcgtgcgcctggatcacaac
ttcgtgatcgtcaacgccggcctgaagtccgaagctttcatccctgttgaagaattcaag
aacgacaacggcgaagtcgaagtcaacgtcggcgacttcatctccgttgcgatcgaatcc
ctggaaaacggtttcggcgacaccatcctgtcgcgcgacaaggccaagcgtctggcatcg
tggctctcgctggaaaaggcgatggagtctggcgagatcgtcaccggcaccgtcaatggc
aaggtcaagggcggcctgaccgtgctgaccaacggcatccgcgccttcctgccggggtcg
ctggtcgacacccgtccggtcaaggacaccaccccgttcgaaggcaagaccctggaattc
aaggtcatcaagctggaccgcaagcgcaacaacgtggtgctgtcgcgccgcgccgtgatc
gaagcctcgatgggcgaagagcgcgccaagctgatggaaaccctgaaggaaggcaccgtc
gtcaccggtatcgtcaagaacatcaccgactacggtgcgttcgttgacctgggcggcatc
gacggcctgctgcacatcaccgacctggcatggcgtcgcgtgcgtcacccgtcggaagtg
ctgtcggttggccaagagatcaccgccaaggtcctgaagtacgatcaagagaagaaccgc
gtctccctgggcgtgaagcaactgggcgacgatccgtggaccggtctgtcgcgtcgctac
ccgcaaggcacccgcctgttcggcaaggtcaccaacctgaccgactacggtgcattcgtg
gaagtcgaacaaggcatcgaaggcctggtgcacgtctccgaaatggactggaccaacaag
aacgtggccccgaacaaggttgtccagctgggcgacgaagtcgaagtcatggttctggaa
atcgacgaagagcgtcgtcgtatctccctgggcatgaagcagtgcaagccgaacccgtgg
gacgacttcgccatgagccacaagaagggcgacaaggtcaagggttcgatcaagtcgatc
accgacttcggcgtcttcatcggcctgccgggcaacatcgacggcctggtgcacctgtcc
gacctgtcctggaccgaagctggcgaagaagccgtgcgcaagttcaagaagggcgacgag
ctggaagccgttgtgctggccatcgacgtggaacgcgagcgcgtttccctgggcgtgaag
cagctggaaggcgacccgttcaacaacttcgctgcgctgaacgacaagggcgcgatcgtg
accggtaccgtcaagtcggttgagcccaagggcgctgtgatccagctgaccgacgaagtc
gaaggctacctgcgcgcttccgaaatctcccgcgaccgcgtggaagatgccggcacccac
ctgaaggttggcgattccgtcgaagccctggtcatcaacatcgaccgcaaggcacgcagc
atccagctgtcgatcaaggccaaggacaacgccgagacccaggaagccatgcagaagatg
tcggctgactccaacgctgcttcgggcaccaccagcctgggcgcgctgctgaaggccaag
ctcgacaacaagaactga
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