Herbaspirillum seropedicae SmR1: Hsero_3695
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Entry
Hsero_3695 CDS
T01268
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hse03032
]
Hsero_3695 (gyrA)
03400 DNA repair and recombination proteins [BR:
hse03400
]
Hsero_3695 (gyrA)
Enzymes [BR:
hse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Hsero_3695 (gyrA)
DNA replication proteins [BR:
hse03032
]
Prokaryotic type
DNA Topoisomerases
Hsero_3695 (gyrA)
DNA repair and recombination proteins [BR:
hse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hsero_3695 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADJ65173
UniProt:
D8IR47
LinkDB
All DBs
Position
complement(4229862..4232507)
Genome browser
AA seq
881 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWN
RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAM
RYTECRLDKISNELLADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNITEVINGALHLLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEYGREGRIAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMV
REMLARAGEANEGGIEAFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDK
IVNEYKDVMAQIADLLDILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLA
TEDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY
ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRY
VFMATSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAVR
FDENDVRPMGRTARGVRGMNLEETQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH
GRGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTL
IAVEDGTKLSGLQRVVESDVEDAVEGDNAEGAGSEAPAAGE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgctaaagaaaccatccccatttccctcgaagaagagatgcgcaagagt
tacctcgattacgccatgagcgtgatcgtgggccgggcactgccggatgtgcgcgatggc
ttgaagccggtgcaccgccgtgtcctgtatgcgatgcacgagatgaacaacgtctggaac
cgcccgttcgtgaaatgcgcgcgcgtggtcggcgaagtcatgggtaagtaccacccgcac
ggcgacgcctccatctatgacaccctggtgcgcatggcccaggacttctcgctgcgctat
accctagtcgatggccagggcaacttcggttccatcgacggcgacggcgcggctgcgatg
cgttataccgagtgccgcctggacaagatttccaatgaactgctggccgacatcgagaag
gaaaccgtcgatttcgtgcccaactacgacggcaaggaaaaggaaccctcggtcctgccg
acccgtatccccaacctgctggtcaacggctcctccggcatcgccgtgggcatggccacc
aacattccgccgcacaacatcaccgaggtgatcaatggcgcgctgcacctgctggccaac
gagcaatgcaccatcgatgaactgatcgagctggtgccggcgccggacttccccaccggc
ggcatcatctatggcgtctcgggcgtgcgcgatggttaccgcaccggccgtggccgcgtg
gtcatgcgcgccaagacccacttcgaagagtatggtcgcgaaggccgtatcgccatcatc
gtcgatgagctgccctaccaggtcaacaagaaggcgctgctcgaacgcatcgccgagctg
gtgcgcgacaagaagctcgaaggcatctccgacctgcgcgacgagtccgacaagtcgggc
atgcgcgtggtcatcgaattgaagcgcggcgaagtgccggaagtggtgctcaacaatctg
tacaagcagacccagctgcaagacaccttcggcatgaacatggtggcgctggtcgatggc
cagccgcgcctgctgaacctcaagcaattgctggaatgcttcctgtcgcaccgccgcgaa
gtggtcacccgccgcaccgtgttcgaactgcgcaaggcgcgcgaacgtggccacgtgctg
gaaggcctggcggttgcgctggccaatatcgatgacttcatcgccatcatccgtgccgca
ccgaccccgccgatcgccaaggccgaactgatgtcgcgcgcctgggattcgtccatggtg
cgtgagatgctggcccgcgccggcgaggccaatgaaggcggcatcgaagccttccgtccg
gaaagcctgccggcccattacggcatccagtccgatggtctctacaagctctccgacgaa
caggcccaggaaatcctgcagatgcgtctgcaacgcctgaccggtctggagcaggacaag
atcgtcaacgaatacaaggacgtgatggcgcagatcgccgatctgctggacatcctggcc
aagccggcccgcgtgaccgccatcatcaccgacgaactcaacgccgccaagaacgacttc
ggcatcggcgccaaggacgaacgtcgctccaccatcgagcacaacgccaccgacctggcc
accgaagacctgatcacgccgcaggacatggtggtcacactctcgcacaccggctacatg
aagtcgcaaccggtttccgagtaccgcgcgcaaaagcgcggcggtcgcggcaagcaagcc
atggcgaccaaggatgacgactggatcgaccagctcttcatcgccaatacgcacgactac
atcctgtgcttctccaaccgtggccgcctgtactggctgaaggtgtgggaagtgccgcag
ggttcgcgcaattcgcgcggcaagcccatcgtcaacatgttcccgctgcaggatggcgag
aagatcacggtgatcctgccggtgtcgggcgccaaccgcagcttcccggatgaccgctat
gtcttcatggccaccagcctgggcacggtcaagaagaccccgctgtcggacttttccaat
ccgcgcaaggccggcatcatcgcagtggacctggatgagggcgacttcctgatcggcgct
gcgctgaccgatggccagcatgacgtgatgctgttctcggacggcggcaaggccgtgcgc
ttcgacgaaaacgacgtgcgcccgatgggccgtaccgcccgcggtgtgcgcggcatgaac
ctggaagaaacccagcaggtcatcgccctgctggtggccgagaacgaacagcagtccgtg
ctcaccgccaccgaaaacggcttcggcaagcgcactccgatcaccgagtacacccgtcac
ggccgtggcaccaagggcatgatcgccatccagaccagcgaacgcaacggcaaggtcgtg
gccgccacgctggtggattccaccgatgagatcatgctgatcaccaccggtggcgtgctg
atccgcacccgtgtctcggagatccgggagatgggtcgcgccacccagggtgtgaccctg
attgccgtggaagacggcaccaagctgtccggcctgcaacgcgtggtcgagtccgatgtg
gaagatgcagtcgaaggcgacaatgccgagggcgccggcagcgaggctcctgccgctggc
gagtaa
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