Herbaspirillum seropedicae SmR1: Hsero_3732
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Entry
Hsero_3732 CDS
T01268
Name
(GenBank) signal transduction protein containing sensor and EAL domains protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Hsero_3732
Enzymes [BR:
hse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Hsero_3732
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
CSS_CxxC
Motif
Other DBs
NCBI-ProteinID:
ADJ65210
UniProt:
D8IR84
LinkDB
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Position
complement(4275238..4276872)
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AA seq
544 aa
AA seq
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MSNKNRIVAWTIVATAVAAIAPVAAMMWLSRQAVAQAEHERLARYAESVIARAAHSFDET
QRSLKSLSPLLLLPCSDEHIAQMRLISVNSRSIEEMGYYEHGQLKCTSWDSSVGARRRRQ
AEPVFTTADGVEVALDQRSFVADGPTMLSIQYGAHSALVHRLRFVDVVLEKGVHVVLARN
GFGPVAQYGGPVAAGVAEHALDGLGRQDVDGFFISTVSRDGWTAAAIVDGDHVLEEMTGQ
QRWFLPVGILLGIGLVMLVLRVSQARLSPLADLQLAVKKKEFIVHYQPIIEMASGRCIGA
EALLRWRRPDGSIVRPDFFIALAEESGLILPLTDLVVDTVVREMRDTLRQDRALHIAINV
AAQDMKTGRILEVVSQALAGSDIRPEQLWMEATERGCMDIASASLTLARAREMGHSMALD
DFGTGYSNLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLKLYIVAEGVE
TLEQAAYLAERGVDFAQGWLFSRPLPVEEFVAFYCATLADYGSGPEIIRGPQPASTDSPA
ALDA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacaagaacaggatcgtggcatggaccatcgtggccacggcagtggcggccatt
gcaccggtggcggcaatgatgtggctgtcgcgccaggccgtggcgcaggccgagcatgaa
cgtctggcgcgctatgccgagagcgtcatcgcgcgcgccgcgcacagtttcgacgagacc
cagcgctcgctgaagtctttgtcgcctttgctgctgttgccctgttcggacgagcacatt
gcccagatgcgcctgatcagcgtcaattcccgcagcatcgaggagatgggctattacgaa
catggccagctcaagtgcacctcctgggacagcagcgtcggcgcgcggcggcgccggcag
gccgagccggtctttaccacggccgacggtgtcgaggtggcgctggaccagcgctccttc
gtcgctgatgggcccacgatgctgtcgatccagtatggcgcgcacagtgcgctggtgcat
cgcctgcgtttcgtggacgtggtgctggagaagggcgtgcatgtggtgctggcgcgcaat
ggtttcggcccggtggcgcagtatggaggcccggtcgcagcgggcgtcgccgagcatgcg
ctggacggactgggcaggcaggacgtggacggtttcttcatctccaccgtcagccgcgat
ggctggaccgccgcggccatcgtcgatggcgatcatgtactggaagagatgaccggccag
cagcgttggttcctgccggtcggcatcctgctgggcattggcctggtgatgctggtgctg
cgggtctcgcaggcccgcctgtcaccgctggccgacctgcagctggcggtgaagaagaag
gaattcatcgtccattaccagcccatcatcgagatggccagcggccgctgcatcggcgcc
gaggcgctgctgcgctggcggcggcccgatggcagcatcgtgcggcctgacttcttcatt
gcgctggccgaggagagcgggctgatcctgccgttgaccgatctggtggtcgataccgtg
gtcagggaaatgcgcgacaccttgcgccaggaccgggcgttgcacattgccatcaatgtc
gccgcccaggacatgaagaccgggcgcatcctcgaggtggtcagccaggccctggccggc
agcgacatccgccccgaacagctgtggatggaagccaccgagcgcggctgcatggatatc
gcctcagccagtctgaccctggcgcgcgcccgcgaaatggggcattcgatggcgctggac
gacttcggcaccggctattccaacctgcaatacctgcagggcttgccgatggatgcgctc
aagatcgacaaatccttcgtcagcaccatcggcaccggcgcggccaccagcgccgtgatc
gatcacatcatcgccatggccaagagcctgaagctctacatcgtcgcggaaggggtggaa
acgctggaacaggccgcctacctcgccgagcggggcgttgacttcgcccagggctggctg
ttttcccggcccttgccggtcgaggagttcgtcgccttctattgcgccacgctggccgac
tatggcagcggaccggaaatcatccgcggaccgcagccggcatcgactgacagcccggca
gcgctggacgcttga
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