Herbaspirillum seropedicae SmR1: Hsero_3752
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Entry
Hsero_3752 CDS
T01268
Symbol
kaiC
Name
(GenBank) RecA-superfamily ATPase protein
KO
K08482
circadian clock protein KaiC
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Hsero_3752 (kaiC)
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GFIT
Motif
Pfam:
ATPase
AAA_25
PAXNEB
NACHT
Rad51
AAA_22
nSTAND3
RecA
AAA_16
DnaB_C
NPHP3_N
AAA_19
AAA_30
MEDS
DUF7125
AAA_18
SLFN-g3_helicase
AAA_33
ABC_tran
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ADJ65230
UniProt:
D8IRA4
LinkDB
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Position
complement(4300068..4301540)
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AA seq
490 aa
AA seq
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MNEQPQSLPPAPTGGRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLASQ
IGWAQARGGNQVMLLTLIAESHAKMLNHVSNFDFFDESLVGDRMQMLSGYAALASEGLRG
LLRMISAELSRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNALVFTMNCTTLLLSPVE
GNLPESENTLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFPRF
EATATRAGKVPGTSDRYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIEQG
LKDGQQCLILGFYESPERLLAKARKAGMQLDAHIDSGALQVMWQLPLEMLCDDLAKRMLD
DIARRGVTRLLIDGVDGLRSIVVQPQRMRPFLVALTNELRARGVTTFITEQLPYFRESRP
QVDPSSSQLYENMMLLEYVVKDDVNRRQIAVMKLRENGYDGAARLMNISDAGIEIDGLVS
PASTPLVDGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcaaccgcagtcccttccgccagccccgacgggtgggcggcccagccgcatt
tccctgctcagcacgggcatcgccgggttcgatgagatcctcggcggcggcttgccggcc
ggcagcctctatctgatccagggcctggccggcagcggcaagaccacgctggcctcccag
atcggctgggcgcaggcgcgcggcggcaaccaggtgatgctgctcacgctcatcgccgag
tcgcatgccaagatgctcaatcatgtgagcaatttcgacttcttcgacgaaagcctggtc
ggcgaccgcatgcagatgttgagcggctatgccgcgctggccagcgaggggctgcgcggt
ctgctgcgcatgatcagcgccgaactgagccggcaccgtccggccatgctgatcatcgat
ggcttccgctcggtgcgcgattccgggccttcggacctgaacctgtccgaattcatgcat
tcgctgaatgccctggtcttcaccatgaattgcaccacgctgctgctctcgcccgtggaa
ggcaacctgcccgagtccgagaacaccctggtcgatggcgtcatcgaactgagccagtac
gagtccggcatgcagctggtgcgcgagatcaaggtcttcaagctgcgtggggccaaccat
ttgctgggcaagcatgtcttcgagatcaaccagagcggggtcgagatcttcccccgcttc
gaggccaccgccacccgcgccggcaaggtgccgggcacttccgatcgctatgtcagcgtg
ggcatcccgtcctgggacaagtgcatcggcggcggtgtggtcagcggttcgctgacctgc
ctgttgggcagccccggcgtgggcaagaccctgatgggcctgcatttcatcgagcagggc
ttgaaggatggccagcaatgcctgatcctgggcttctatgaatcgcccgaacgcctgctg
gccaaggcgcgcaaggcgggcatgcagctcgacgcccatatcgacagcggggccctgcag
gtgatgtggcaactgccgctggaaatgctctgcgacgacctggccaagcgcatgctggac
gacatcgcccggcgcggcgtgacccgcctgctcatcgacggtgtcgatggcctgcgcagc
atcgtagtgcagccgcagcgcatgcgtcccttcctggtggcgctgaccaatgaactgcgc
gcgcgcggggtgaccaccttcatcaccgagcagttgccttacttccgcgagtctcgcccg
caggtcgatcccagttcttcgcagctctatgaaaacatgatgctgctggaatacgtggtc
aaggacgacgtcaaccgccgccagattgccgtgatgaaactgcgcgagaatggctatgac
ggcgctgcccgcctgatgaacatctccgacgccggcatcgagatcgatggcctggtgtcg
cccgccagtacccctctggtggatggacgctga
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