Herbaspirillum seropedicae SmR1: Hsero_3825
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Entry
Hsero_3825 CDS
T01268
Symbol
glcF
Name
(GenBank) glycolate oxidase, iron-sulfur subunit oxidoreductase protein
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00630
Glyoxylate and dicarboxylate metabolism
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Hsero_3825 (glcF)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
Hsero_3825 (glcF)
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Gene cluster
GFIT
Motif
Pfam:
CCG
Fer4_8
Fer4_17
Fer4_7
Fer4_10
Fer4_9
Fer4_16
Fer4
Fer4_6
Fer4_4
Fer4_21
Fer4_2
Fer4_20
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ADJ65303
UniProt:
D8IRW0
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Position
complement(4380559..4381803)
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AA seq
414 aa
AA seq
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MQTNLADFIRNTQAGQEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE
GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQVPRPLSQRVMRTALK
ELVPRKWIFRPAMKAGQMLRPLLPKLLQNKVPLPQEAGAWPTRTHARQMLYLEGCVQPSM
SPNINSATARVLDALGVQLFAPPKAGCCGAIRYHMNDQEGGLEDMRRNIDAWWPYIEGRD
GIRADTIVMNASGCGSTVKEYGHLLQHDPVYAEKARRISHMTRDISEILPEFEEALKHKL
KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYSILQPEL
SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLDAALQAPS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaacttagccgatttcatccgcaacacccaggccggccaggaagccgacagc
atcctgcgctcctgcgtgcattgcggcttctgtaccgccacctgtcccacctaccagttg
ctgggcgacgagctggatggaccgcgcggccgcatctatctcatcaagcaggtgctcgaa
ggcaagcccgccaccgccgcgacgcaatcgcacctggaccgctgcctgacctgccgcaac
tgcgaatccacttgcccctccggcgtgcagtatggccgcctggtcgatatcggccgcaag
gtggtggaagaacaggtgccgcgaccgctgtcgcagcgcgtgatgcgcacggccctgaag
gagctggtgccgcgcaagtggattttccgtcccgccatgaaggccggacagatgttgcgt
ccgctgctgcccaagctgttgcagaacaaggtgccgctgccgcaggaggcgggcgcctgg
cccacgcgcacgcatgcgcgccagatgctgtatctggaaggttgcgtgcagccctcgatg
tcccccaacatcaacagcgccaccgcgcgcgtgctcgatgcgctgggtgtgcaattgttc
gcgccgcccaaggccggctgctgtggcgcgatccgctatcacatgaatgaccaggagggc
gggctggaagacatgcgccgcaacatcgacgcctggtggccctacatcgagggacgcgat
ggcatccgcgccgataccattgtcatgaatgcctccggctgtggttccaccgtcaaggag
tatggccatctgctgcagcacgatccggtctatgccgaaaaggcgcgccgcatctcccac
atgacccgcgacatcagcgaaatcctgcccgagttcgaagaagcgctgaagcacaagctc
aaggacttcaacggcaagcgcgtggcctatcacccgccctgcacgctgcagcacggccag
aagatccgcggcaaggtcgagggcatcctgcgcgcggccggcgtggatgtgcaactgtgc
gccgacagtcacctctgctgcggctcggccggcacctattcgatcctgcaaccggagctg
tcctatcgcctgcgcgacaacaagatcagcaagctgcaggccaccgatcccgacatgatc
gtcaccggcaacatcggttgcgtcacgcatctgcaatctggcaccgacacgcccgtgcgg
cactggatcgaattgctggacgccgctctgcaagcgccttcctga
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