Herbaspirillum seropedicae SmR1: Hsero_3827
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Entry
Hsero_3827 CDS
T01268
Symbol
glcD
Name
(GenBank) glycolate oxidase (FAD-linked subunit) oxidoreductase protein
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00630
Glyoxylate and dicarboxylate metabolism
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Hsero_3827 (glcD)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
Hsero_3827 (glcD)
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ADJ65305
UniProt:
D8IRW2
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All DBs
Position
complement(4382911..4384398)
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AA seq
495 aa
AA seq
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MNAPVQPSFAPARQREVVDALRRVVPAHCVLCDEEDTRPYECDGLAAYRQLPMVVVLPEN
EAQVVAIMKTCHALQVQIVPRGAGTGLSGGATPIADGVVVSTAKFNQILQMDKYSRTAVV
QPGVRNLAISEAAAPHGLYYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNVLRVRM
VTIEGEVVELGSGALDAPGLDLLAVFIGSEGMLGVVTEVTVKLVPKPQAARVIMASFDDV
VKGGNAVANVIAAGIIPAGLEMMDKTSSRMVEPFVKAGYDIDAEAILLCESDGTVEEVEE
EIGRMTDVLNASGATAIACSQSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKKLA
QVLLGIAEMEKKYGLRCANVFHAGDGNLHPLILFDANIADEFHRAELFGAEILELCVEVG
GTITGEHGVGIEKINSMCVQFSPAERETFFKLKRAFDPAFLLNPDKAIPTLHRCAEYGKM
HVQRGQLRFPDLPRF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccagtccaaccgtccttcgcgccggctcgccagcgtgaagtcgtcgatgcc
ctgcgccgggtcgtgcccgcgcactgcgtgctctgcgacgaggaagacacccgtccctac
gaatgcgacggcctggccgcctaccgccagttgcccatggtggtggtgctgcccgagaac
gaggcccaggtggtggccatcatgaagacctgccacgcgttgcaggtgcagatcgtgccg
cgcggcgccggcaccggcctctctggcggggccaccccgattgccgatggcgtggtggtg
tccacggccaagttcaaccagatcctgcagatggacaagtattcccgcaccgccgtggtc
cagcccggcgtgcgcaacctggccatttccgaagcggcggccccgcacggcctctattac
gcgccggacccctcctcgcagatcgcctgttccatcggtggcaacgtggccgagaactcg
ggcggcgtgcattgcctgaaatacggcctgaccgtgcataacgtgctgcgcgtgcgcatg
gtcaccatcgaaggcgaggtggtggagctgggcagcggcgcgctggatgcgccgggcctg
gacctgctggccgtcttcatcggctccgaaggcatgctgggcgtggtcaccgaagtgacc
gtcaagctcgtgcccaagccacaggcggcgcgcgtgatcatggcctccttcgacgatgtg
gtcaagggcggcaatgcggtggccaacgtgatcgccgccggcatcattcccgcaggcctt
gagatgatggacaagaccagttcgcgcatggtggaacccttcgtcaaggccggctatgac
atcgacgccgaagccatcctgctgtgcgaatccgacggtaccgtggaagaagtggaagaa
gaaatcggccgcatgaccgacgtgctcaatgccagcggcgccaccgccatcgcctgctcg
cagtcggaggccgagcgcctgcgcttctggtccggccgcaagaacgccttcccggcggca
ggccgcatctcgcccgactactactgcatggatggcaccatcccgcgcaagaagctggcg
caggtgctcttgggcatcgccgagatggaaaagaaatacggcctgcgctgcgccaacgtc
ttccatgccggtgacggcaacctgcatccgctgatcctcttcgatgccaacatcgccgat
gaattccaccgcgccgaactgttcggcgccgagatcctggagctgtgcgtggaagtgggc
ggcaccatcaccggcgagcatggcgtgggcatcgagaagatcaattccatgtgcgtgcag
ttttcgcccgccgagcgcgagaccttcttcaagctcaagcgcgccttcgacccggccttc
ctgctcaacccggacaaagccattcccaccctgcatcgctgcgccgagtacggcaagatg
catgtgcagcgcggccagctgcgcttccccgatctgccgagattctga
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