Herbaspirillum seropedicae SmR1: Hsero_3832
Help
Entry
Hsero_3832 CDS
T01268
Symbol
ispA
Name
(GenBank) geranyltranstransferase (farnesyl-diphosphate synthase) protein
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00900
Terpenoid backbone biosynthesis
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Hsero_3832 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hse01006
]
Hsero_3832 (ispA)
Enzymes [BR:
hse01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Hsero_3832 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Hsero_3832 (ispA)
Prenyltransferases [BR:
hse01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Hsero_3832 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ADJ65310
UniProt:
D8IRW7
LinkDB
All DBs
Position
complement(4390150..4391085)
Genome browser
AA seq
311 aa
AA seq
DB search
MAAPGVVAAPAFAQWMGQVQSGMEEVLNRFLPSASVVPARLHEAMRYTAMDGGKRVRPLL
VYAAGELFDTPRALLERAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATAL
LVGDALQAQAFDTLAAPLESEAGSADAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASV
GMTLSLAELEQMHRLKTGALLRAAVLLGALGGKALTAAESAALDDYARAIGLAFQVVDDI
LDATADSATLGKTAGKDAADNKPTYVSILGLAESQALAGRLQADAHEALAPFGGKARRLR
ELADLIVQRKT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccccggcgtcgtagccgcaccggcattcgcccagtggatgggccaggtgcag
agtggcatggaagaggtgttgaaccgtttcctgccgtccgcctcggtggtgccggcgcgg
ctgcatgaagccatgcgctacaccgccatggatggcggcaagcgcgtgcgcccgctgctg
gtgtatgccgccggcgagctgttcgatacgccgcgcgcgctgctggagcgcgccgccgcc
gcagtcgagatgatccacgtctattcgctggtgcatgacgacatgccctgcatggatgac
gatgcgctgcgccgtggcaagcccaccgtgcacatccgatacgacgaggccaccgcactg
ctggtcggtgacgccctgcaggcgcaggccttcgacaccctggccgcgccgctggagagt
gaagcgggcagcgccgacgccggcctgccggcacgtcagctgcgcatggtcaagctgttg
gccgaggccgccggctcggtgggcatgtgcggcggccaggccatcgacctggccagcgtg
ggcatgaccctgtcgctggccgaactggaacagatgcaccgcctgaagaccggcgccctg
ttgcgcgcggccgtgctgctgggcgcgctgggcggcaaggcgctgacggccgccgaaagc
gcggcgctggacgattacgcccgcgccatcggcctggccttccaggtggtcgacgacatc
ctcgacgccaccgccgactcggccacgctgggcaagaccgccggcaaggacgccgccgac
aacaagccgacctatgtgtccatcctcggcctggcggaatcgcaggccctggccggcagg
ctgcaggccgatgcgcatgaggcgctggccccgttcggcgggaaggcgcgccgcctgcgc
gaactggccgacctgatcgtacaaagaaagacttaa
DBGET
integrated database retrieval system
