Herbaspirillum seropedicae SmR1: Hsero_3859
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Entry
Hsero_3859 CDS
T01268
Name
(GenBank) transcription regulator protein
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_3859
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Hsero_3859
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ADJ65337
UniProt:
D8IRZ4
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Position
complement(4417728..4418723)
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AA seq
331 aa
AA seq
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MESKWLEDFVSLAETRSFSRSAELRHVTQPAFSRRIQSLEAWLGTDLIDRTSYPTRLTAA
GEVFYEQAVAMLGQINNTRALLRGKRPTAQTTIDFAVPHTLSLTYMPKWLSALESGFGAI
NTRLIALNVHDAVMTIVEGGCDLLLCYHHPRQPVQLDSSRYDMLTMGTETLRPYSRCDRN
GKPDYVFPGSAKAPVPFLSYTSNAYLGRMVELMMADTKRPLHLDKHYETDMSESLKMMAL
EGHGVAFLPESSVVREVRNRQLARTDVPSGEWEVEMEIRLYRERPTAQRAGKALVARLWE
YLVELDAQRQEGGKGSARTSGGKAGRAAEKG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaatggcttgaggatttcgtctccctggcggaaacgcgcagtttcagtcgc
tcggcggagttgcggcatgtgacgcaaccggccttttcgcgacgcatccagtcgctggag
gcctggctgggcaccgacctgatcgaccgcacctcctatcccacccgcctgaccgccgcc
ggcgaagtcttctacgagcaggccgtggccatgctcggccagatcaacaacacgcgcgcg
ctgttgcgcggcaagcgtcccaccgcgcagaccaccatcgactttgcggtgccgcatacc
ctgtcgctgacctacatgccgaagtggttgagcgcgctggaatccggctttggcgccatc
aatacgcgcctcatcgccctcaatgtccacgacgccgtcatgaccatcgtcgaaggcggc
tgcgacctgcttctctgctaccaccacccgcgccagccggtgcagctcgatagcagccgc
tatgacatgctgaccatgggcacggaaaccttgcgtccctattcgcgctgcgaccgcaat
ggcaagcccgattacgttttcccgggcagcgccaaggctcccgttcccttcctctcatac
accagcaacgcctatctgggacgcatggtcgagctgatgatggccgataccaaacgcccg
ctgcacctggacaagcactatgagaccgacatgtcggagagcctcaagatgatggcgctg
gagggccatggggtggctttcctgccggaatcctcggtggtacgcgaagtacgtaaccgc
cagttggcgcgcaccgatgtgccctccggggaatgggaagtggaaatggagattcgcctc
taccgcgaacgccccactgcgcagcgcgctggcaaggcgctggtggcgcgcttgtgggag
tatctggtggagctcgatgcgcagcgccaggaggggggcaaggggagtgcgcgcacgtcc
ggtggcaaggcaggacgtgccgccgaaaagggctga
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