Herbaspirillum seropedicae SmR1: Hsero_3860
Help
Entry
Hsero_3860 CDS
T01268
Name
(GenBank) ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components, protein
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_3860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3860
Transporters [BR:
hse02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Hsero_3860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
AAA
RsgA_GTPase
AAA_33
AAA_15
Zeta_toxin
AAA_24
DUF6320
AAA_18
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
ADJ65338
UniProt:
D8IRZ5
LinkDB
All DBs
Position
complement(4418799..4420703)
Genome browser
AA seq
634 aa
AA seq
DB search
MRRYPNSSSSPQAPIQRQRGDWEVVRTLLPYLWTYKWRVLLALAFLVGAKLANVGVPLVL
KRLVDAMTITPTHPQALLVLPLGLLVAYGALRLATALFTELRELMFARVTQRAVRTIALQ
VFRHLHALSLRFHLNRQTGGMTRDIERGTRGVSSLVSYTLFSILPTLIEIALVLAYLITH
YDVWFSVITAGALVCYILFTITVTEWRTHFRRTMNELDSHANTRAIDSLLNYETVKYFGN
EEFEARRYDEGLQRYERAAVKSQSSLSLLNTGQSAIIAIAVTLILWRATVGVIDGSMTLG
DMVLVNAFMIQLYIPLNFLGVLYREIKQSLADMERLFSLLEEHREVADSADAKPLKTQGA
NLHFDHVDFSYERNRQILFDVDFTVQAGTTTAVVGHSGSGKSTLSRLLYRFYDVDAGAIR
IDGQDLRTVTQASLRQAIGIVPQDTVLFNDTIEYNIAYGKPGATREQIVAAAKAAYIHDF
IESLPDGYASMVGERGLKLSGGEKQRVAIARTLLKDPAILIFDEATSALDSRAEQAIQQQ
LEEIARERTTLVIAHRLSTIVNAQQILVLDHGRIVERGTHAGLLMAGGLYAQMWLRQQAG
ADEEGGSPAPLLEAVAAPAEPGAEPSVMLPAQQR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctatccgaattcctcgtcctcgccccaagcccccatccaacgccagcgcggc
gactgggaagtggtcaggacgctgctgccctatctgtggacctacaagtggcgcgtgctg
ctggcgctggctttcctggtcggggccaagctggccaatgtgggcgtgccgctggtgttg
aagcggctggtcgacgccatgaccatcacgcccacccatccgcaggcgctgctggtgctg
ccgctgggcctgctggtggcgtatggcgcattgcgcctggcgactgcgctcttcaccgaa
ttgcgcgaactgatgtttgcccgcgtcacccagcgcgccgtacgcaccattgcgctgcag
gtgtttcgtcatctgcatgcgctgtcgctgcgcttccacctcaaccgccagaccggcggc
atgacgcgcgacatcgagcggggcacgcgaggtgtttcttcgctggtgtcgtacacgctc
ttttccatcctgccgaccttgatcgagatcgccctggtgctggcttatctgatcacgcat
tacgatgtctggttctccgtcatcaccgctggcgcgctggtgtgctacatcctcttcacc
atcacggtcaccgagtggcgcacgcatttccggcgcaccatgaacgagctggattcgcac
gccaatacccgcgccatcgattccctgctcaactacgagacagtcaagtatttcggcaac
gaggaattcgaggcgcgccgctatgacgaaggactgcagcgctatgaacgcgcggcggtg
aagtcgcagagttcgctgtcgctgctcaacaccggccagtcggcgatcatcgccatcgcg
gtcacgctcatcctgtggcgcgcaacagtgggcgtcatcgatggcagcatgaccctgggc
gacatggtgctggtcaatgccttcatgatccagctctacattccgctgaacttcctgggc
gtgctctatcgcgagatcaagcagagcctggccgatatggaacgtctgttctcgctgctg
gaagaacatcgcgaagtggccgacagcgccgatgcaaagcccttgaagacacaaggagcg
aacttgcatttcgatcacgttgatttcagctatgaacgtaatcgccagatcctcttcgat
gtcgatttcacggtgcaggccggcaccaccacggcggtggtgggacatagcggttcgggc
aagtccacgctgtcacggctgctataccgtttctatgatgtggatgccggcgcgatccgc
atcgacggccaagacctgcgcacggtcacgcaggcctcgctgcgccaggccatcggtatc
gtgccgcaggatacggtgctcttcaacgacaccatcgaatacaacatcgcctatggcaag
cccggtgcgacccgcgagcagatcgtcgctgcggccaaggcagcctatatccacgacttc
atcgaatcgctgccggacggctatgccagcatggtcggcgagcgcggcctgaagctgtcc
ggtggcgagaagcagcgcgtggccattgcccgcacgctgctcaaggacccggccatcctg
atcttcgatgaggccacctcggccctggactcgcgcgccgagcaggcgatccagcaacag
ctcgaagagatcgcccgtgagcgcactacgctggtcatcgctcaccgtctttcgaccatc
gtcaatgcccagcagatcctggtgctggaccatggccgcatcgtcgagcgcggcacccat
gccggactgttgatggccggcggtttgtacgcgcagatgtggctgcgccagcaggccggc
gcggacgaggagggcggctcccctgcgccgctgctggaggcggtggcagcgccagccgag
ccgggcgccgaacccagcgtcatgctgcctgcgcagcagcgctga
DBGET
integrated database retrieval system
