Herbaspirillum seropedicae SmR1: Hsero_3913
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Entry
Hsero_3913 CDS
T01268
Name
(GenBank) P-loop-containing kinase protein
KO
K06958
RNase adapter protein RapZ
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hse03019
]
Hsero_3913
Messenger RNA biogenesis [BR:
hse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Hsero_3913
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_29
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADJ65386
UniProt:
D8IS43
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All DBs
Position
4477469..4478371
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AA seq
300 aa
AA seq
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MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIQEGASRLAVATDARS
ADSLATLRHDIDQLRADGHDVKVFFLTASSETLITRFSETRRSHPLSHRLLPGGNPSDRL
TLSECIELEKEMLADMQEIGLVMDTSQLSSNKLRGWIKDLVDLERSPLTLLIESFAFKHG
LPLDADLVFDVRMLPNPHYDLALRPLTGRDQPVIDFLDADAEVAEMFNDIRRFVEKWLPS
FKGDNRSYLTVAIGCTGGQHRSVYLAERLASHFRATEQVVCRHRQLDRRQQVVAAQSPQQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgttctgatcaccggcatctccggctccggcaaatcggtagcactgcatgtg
ctcgaagacgccggctatttctgcgtcgacaacctgccaccgtccctgctgtgcgacctg
gtgcagacccgcatccaggaaggcgccagcaggctggccgtggccaccgatgcgcgcagc
gccgattccctggccaccctgcgccacgacatcgaccagttgcgcgccgacggccacgac
gtcaaggtcttcttcctgaccgcctccagcgaaaccctgatcacccgcttttccgagacc
cgtcgcagccacccgctgtcacaccgcctgctgccgggcggcaatcccagcgaccgcctg
acgctgtccgaatgcatcgaactcgagaaggaaatgctggccgacatgcaggagatcggg
ctggtgatggatacctcgcagttgagttccaacaagctgcgcggctggatcaaggacctg
gtggacctggagcgctcgccgctgacgctgctcatcgaatccttcgccttcaagcacggc
cttccactggatgccgacctggtcttcgacgtgcgcatgctgcccaatccgcactatgac
ctggcgctacgccccttgaccggacgcgaccagccggtcatcgatttcctcgatgccgat
gccgaggtggcggagatgttcaacgatatccgtcgcttcgtggaaaagtggctgccgtcc
ttcaagggcgacaaccgcagctacctgaccgtggccatcggctgcaccggcggccagcac
cgttcggtctacctggccgagcgcctggccagccatttccgcgccaccgaacaggtggtg
tgccgccaccgccagctagaccgtcgccagcaggtcgtcgctgcgcaaagcccccagcag
tag
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