Herbaspirillum seropedicae SmR1: Hsero_3953
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Entry
Hsero_3953 CDS
T01268
Name
(GenBank) AraC family transcription regulator protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_3953
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Hsero_3953
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
HTH_17
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ADJ65424
UniProt:
D8ISK8
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Position
complement(4529362..4530348)
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AA seq
328 aa
AA seq
DB search
MLQSIHRFQDVHVHAAAIGAWKQTYAQISAGKLESSLMQLSTRRCHAFRERINKRVVQHG
EAPRDQICFAFPIAAPGAAHVQGREADDKSILFLQGGEEFMFHMPMDTDLLSLTFDRDLF
EEHLHQMPDPDRIAALLKQPVIKVPPKGLRACRERLLTLFSHAMLQFDDGPRQADMPSVQ
TLQREQALESSLLGELLGLLCAPDCDPVRQMSTTRSYIVEKLHRQTIVDAANVPSIFEVC
QRLQVSRRTVQNSFQTVAETTPLNYLRCVRLNGVRRELLSTTHQEASIGDIASRWGFFHL
SHFAEDYQALFGELPSQTARRVPQKIFQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaagcattcaccgttttcaggacgtacatgtgcatgccgccgccattggcgca
tggaagcagacctatgcacagatttccgcgggcaagctggagagttcgctgatgcagttg
tcgacccggcgttgccacgccttccgcgagcgcatcaacaagcgcgtcgtgcagcatggc
gaggcgcccagggaccagatctgctttgccttccccatcgccgccccgggcgcagcgcac
gtgcagggacgcgaagccgatgacaagagcatcctgttcctgcagggtggcgaggagttc
atgttccacatgcccatggacaccgacctgctctcgctgaccttcgaccgcgacctgttc
gaagagcatctgcaccagatgcccgatcccgaccgcatcgcggccttgctcaagcagccc
gtcatcaaggtcccgcccaagggattgcgcgcctgccgcgagcggctgctgacgctcttt
tcgcatgccatgctgcagttcgacgatggcccgcgccaggccgatatgcccagcgtgcag
accctgcagcgcgagcaggcgctggagtcctcgttgctgggcgagctgctgggtttgctc
tgtgcccccgactgcgaccccgtgcgccagatgagcaccacccgcagctatatcgtcgag
aagctgcaccgccagaccatcgtcgacgccgccaatgtgcccagcatcttcgaggtctgc
cagcgcctgcaggtgagccggcgcacggtgcagaacagtttccagacggtggccgagacc
acgccgttgaattacctgcgttgcgtgcgcctgaacggcgtgcgacgcgagctgttgtcc
accacccaccaggaagcctcgattggcgacatcgcttcacgctggggatttttccacctc
agccatttcgccgaggattatcaggccttgtttggggagttgccgtcgcagacggcgcgg
cgtgtgccgcagaagatattccagtag
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