Herbaspirillum seropedicae SmR1: Hsero_3961
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Entry
Hsero_3961 CDS
T01268
Symbol
ssb
Name
(GenBank) single-strand DNA-binding protein (helix-destabilizing protein)
KO
K03111
single-strand DNA-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse03030
DNA replication
hse03430
Mismatch repair
hse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hsero_3961 (ssb)
03430 Mismatch repair
Hsero_3961 (ssb)
03440 Homologous recombination
Hsero_3961 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hse03032
]
Hsero_3961 (ssb)
03400 DNA repair and recombination proteins [BR:
hse03400
]
Hsero_3961 (ssb)
03029 Mitochondrial biogenesis [BR:
hse03029
]
Hsero_3961 (ssb)
DNA replication proteins [BR:
hse03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hsero_3961 (ssb)
DNA repair and recombination proteins [BR:
hse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Hsero_3961 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
Hsero_3961 (ssb)
Mitochondrial biogenesis [BR:
hse03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Hsero_3961 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF5342
Lyase_8_N
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADJ65432
UniProt:
D8ISL6
LinkDB
All DBs
Position
complement(4542168..4542689)
Genome browser
AA seq
173 aa
AA seq
DB search
MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR
KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLGSRQGGGGGGMD
EGGYGGGGGGSYGGGAPRQSAGGGGGGGSSAPRQQPAQRPAPNFSDMDDDIPF
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtcaacaaagtcatcatcgtcggtaacctcggacgcgatccggaaacgcgc
tacatgcccaatggcgaagccgtcaccaacatcgccgtggccacgaccgagagctggaag
gacaagaacaccggcgaaaagaaggaactcaccgaatggcaccgcatcaccttctaccgc
aagctcgctgaaatcgccggccagtacctgaagaagggttcgcagatctacgtcgaaggc
cgcctgcagacccgcaagtggcaggacaaggaaggcgtggagcgctacaccaccgaaatc
atcgccgacaccatgcagatgctgggcagccgccagggcggcggtggcggcggcatggat
gagggcggctatggtggcggcggtggcggcagctacggcggcggcgctccgcgtcagagc
gccggtggcggcggtggtggtggcagcagtgctccgcgccagcagccggcccagcgtccg
gcgcccaacttctcggatatggatgacgatattccgttctga
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integrated database retrieval system
