KEGG   Herbaspirillum seropedicae SmR1: Hsero_3972
Entry
Hsero_3972        CDS       T01268                                 
Name
(GenBank) ABC-type transport system, ATPase component protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:hse00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Hsero_3972
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hse02000]
    Hsero_3972
Enzymes [BR:hse01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     Hsero_3972
Transporters [BR:hse02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    Hsero_3972
 Other transporters
  Pores ion channels [TC:1]
   Hsero_3972
SSDB
Motif
Pfam: ABC_tran BCA_ABC_TP_C AAA_21 SMC_N AAA_30 DO-GTPase2 AAA_19 SbcC_Walker_B AAA_23
Other DBs
NCBI-ProteinID: ADJ65443
UniProt: D8ISM7
LinkDB
Position
4557108..4557851
AA seq 247 aa
MAASSLVVRGLKKSYGARQVVRDVSMEVRSGEVVGLLGPNGAGKTTSFYMIVGLVPSDGG
EIDLDGEPISRLAIHKRATLGLSYLPQEASVFRKLTVEDNIRAVLELRQEDGKPLSRDEI
EGRLNNLLHELQIEKLRESQALSLSGGERRRVEIARALATDPRFVLLDEPFAGIDPIAVI
EIQRIVRFLKERGIGVLITDHNVRETLGICDRAYIINQGTVLASGNPEEIIANESVRRVY
LGEHFRM
NT seq 744 nt   +upstreamnt  +downstreamnt
atggcagcaagctcgctggtcgtgcgcggcctgaagaaaagctatggggcgcgccaggtg
gtgcgcgacgtttccatggaggtgcgcagcggcgaagtggtcggcctgctcggccccaac
ggcgctggcaagacgacctcgttctacatgatcgtcggtctggtgccttccgatggcggc
gaaatcgatctggacggagagcccatctcgcgcctggccatccacaagcgcgccacgctg
ggcttgtcctacctgccgcaggaagcgtcggtatttcgcaagctgaccgtggaagacaat
atccgcgccgtgctggaactgcgccaggaagacggcaagccgctctcccgcgacgagatc
gaagggcgcctgaacaacctgctgcacgaattgcagatcgagaagctgcgcgagagccag
gccctgtcgctgtcgggcggtgaacgccggcgcgtcgagatcgcccgcgcactggccacc
gatccgcgcttcgtgctgctggacgagccctttgccgggatcgacccgattgccgtgatc
gagatccagcgcatcgtgcgcttcctcaaggaacgcggcatcggcgtgctcatcaccgac
cacaatgtgcgcgagaccctgggcatctgcgatcgcgcctacatcatcaaccagggcacc
gtgctggccagcggcaacccggaagagatcatcgccaacgaatcagtgcgccgcgtttat
ctgggcgagcacttccgcatgtaa

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