Herbaspirillum seropedicae SmR1: Hsero_3979
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Entry
Hsero_3979 CDS
T01268
Name
(GenBank) AsnC family transcription regulator protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_3979
03036 Chromosome and associated proteins [BR:
hse03036
]
Hsero_3979
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Hsero_3979
Chromosome and associated proteins [BR:
hse03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Hsero_3979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
AsnC_trans_reg_3
NirdL-like_HTH
Fe_dep_repress
HTH_Crp_2
HTH_5
Staph_reg_Sar_Rot
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ADJ65450
UniProt:
D8ISN4
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All DBs
Position
4565211..4565690
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AA seq
159 aa
AA seq
DB search
MELDTTDLRILNILQENSSISNLELASRINLSPSPTLARVKRLESEGIISRYVALADPHL
LGLKVNVFVKVILERQGAEALAQFETAVSAFDEVMEVYLMTGDEDYLLRIVVPDLLTLEH
FIVDHLTKIPGIKNIRSSFALKQIKYKTALPTPKIKTRR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgataccaccgatttgcgcatcctgaacatccttcaggagaacagttcgatc
agcaatctggagctggccagccgcatcaatctctcgccctcgccgaccctggcccgggtc
aagcggctggaatcggaaggcatcatctcgcgctacgtggcgctggccgatccccacctg
ctgggcttgaaggtcaacgtcttcgtcaaggtgatcctggagcgccagggcgccgaagcg
ctggcccagttcgagacggcggtgagcgccttcgatgaagtgatggaagtctatctgatg
accggcgatgaggattacctgctgcgcatcgtggtgcccgacctgctgacgctggaacat
ttcattgtcgatcacctgaccaagatccccggcatcaagaacatccgctccagctttgca
ctcaagcagatcaagtacaagaccgccctgcccacgcccaagatcaagacgcgccgatga
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