Herbaspirillum seropedicae SmR1: Hsero_3990
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Entry
Hsero_3990 CDS
T01268
Symbol
livK
Name
(GenBank) ABC-type branched-chain amino acid transport system, periplasmic component protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_3990 (livK)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_3990 (livK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3990 (livK)
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_3990 (livK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
CW_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADJ65461
UniProt:
D8ISP5
LinkDB
All DBs
Position
complement(4577013..4578200)
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AA seq
395 aa
AA seq
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MMSEMINTRRRQVMLAGTALVAGGAPMLARAADVLKVGLIVPMSGPFASTGRQIEAAVKL
YQQKYGDSVAGRKVEIVLKDDGGVSPDVTKRLAQELVSREKAQVLMGFGLTPLALAAAPI
ATQAKAPMIVTAAATSIIPQRSPYIVRTGFTLAQVTAPLASWAAKNGIKSVVTFVSDYGP
GLDAEKVFVKTFGEAGGKVMESVRVPLRNPDYAPFLQRVKDAKPQALFVFVPSGEGAAVL
KQFTERGLAAAGIRLICTGDVLDDDLMAGIGAAAKDVVSSHHYSAAHPSAANKEYVEAMA
KANKGMRANFHSVGAYDGMHLLYESLKKTGGDADGDKLLAAMKGMSWESVRGPVAVDAAT
RDIVQTVYMRKAELRGAEFYNVEFDQVEKVRDPGV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcgagatgatcaacacccggcgtcgccaggtgatgctggcagggactgcgctg
gtcgcagggggagcgcccatgctggcgcgtgcagccgatgtgctgaaggtcggtctgatc
gtgcccatgtcggggccgtttgcctctacgggtcggcagatcgaagcggcggtgaagctg
taccagcagaaatatggtgacagcgtggccgggcgcaaggtagagatcgtattgaaggac
gatggcggcgtctcgcccgatgtgaccaagcgcctggcgcaggagctggtgtcacgcgag
aaggcgcaggtgctgatgggcttcggcctgacgccgctggcattggcggctgcgcccatt
gcgacgcaggccaaggcgccgatgatcgtgaccgcagcggcgacgtcgatcatcccgcag
cgctcgccctacatcgtgcgcaccggctttacgctggcgcaggtgactgcgccgctggcc
tcgtgggcggcgaagaatggcatcaagagtgttgtgacctttgtctccgattacgggccg
gggctggatgcggagaaggtgttcgtgaagacctttggtgaagccggcgggaaggtgatg
gagagtgtgcgggtgcccttgcgcaatccggactatgcgcccttcctgcagcgggtcaag
gacgccaagccgcaggctttgtttgtctttgtgccttccggtgagggggcggcggtgctg
aagcagttcaccgaacggggattggcggcggcggggattcgtctgatctgtaccggcgat
gtgctcgatgatgacctgatggcgggcatcggtgctgcggccaaggatgtggtgagcagt
catcactattcggcggcgcatccttctgcggccaacaaggagtatgtggaggcgatggcc
aaggcgaacaaggggatgcgggccaacttccattccgtgggggcttatgacgggatgcat
ctcttgtatgaatccctcaagaagaccgggggggatgcggatggggacaagctgctggcg
gcgatgaaggggatgagctgggagagtgtgcgggggccggttgccgtcgatgcggcgact
cgggatatcgtgcagaccgtttatatgcgcaaggctgagttgcgtggggctgagttctat
aacgtggagtttgatcaggtggagaaggtgcgggatcctggggtttga
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