Herbaspirillum seropedicae SmR1: Hsero_3998
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Entry
Hsero_3998 CDS
T01268
Symbol
livM
Name
(GenBank) ABC-type branched-chain amino acid transport system, permease component protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_3998 (livM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_3998 (livM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_3998 (livM)
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_3998 (livM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADJ65469
UniProt:
D8ISQ3
LinkDB
All DBs
Position
complement(4585103..4586119)
Genome browser
AA seq
338 aa
AA seq
DB search
MKSVNTPNTPNPSAMQPVLRLPNDRWTLLEILFWLLPVAAYFIFPDYLVLISQIMIVGLF
AVSLDLILGYAGIVSLGHAAFFGLGAYTAGLLAVHGWGEPITGLLLAAVVAAIAGFLVSF
LVVRGADLTRLMVTLGIGLMLFEAANKAAFITGGVDGLSGMVMGKIFGVFEFDLNGRVAY
GYSFAVLLLLFVILRRLVNSPFGLGLRGIREGGRRMPAIGADVNRRLVVIFTVAAAVAGV
AGALLAQTTQFVGLDVLGFPRSAELLIILVLGGTGRLYGGLVGALVYMLAQDYLSGLNPA
YWQFWIGLLLIVIVLFARGGLLGGLAVLRDKFFKGGRA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgtcaatacccccaatacccccaacccgtcggccatgcagcctgtgctgcgg
ctgcccaatgaccgctggacgctgctggagatcctcttctggctcttgccggtggcggcc
tatttcatcttccctgattacctggtgctgatcagccagatcatgatcgtgggcctgttt
gcggtgtcgctggacctgatcctgggctatgccggcatcgtctcgctgggccatgccgcc
ttcttcggcctgggcgcctatacagcgggcctgctggccgtgcatggctggggcgagccg
atcaccggcctgctgctggccgccgtggtggcggcgatcgccggtttcctggtgagtttc
ctggtggtgcgcggggctgacctgacgcgcctgatggtgaccctgggcatcggcctgatg
ctcttcgaggcagccaacaaggcggccttcatcaccggcggcgtggatggcctgtccggc
atggtgatgggcaagatcttcggcgtcttcgagttcgacctcaatggccgcgtcgcctat
ggctacagttttgcggtgctgttgctgctcttcgtgatcctgcggcggctggtgaattcg
cccttcggcctgggcctgcgcggcatccgcgagggtggccgtcgcatgccggccatcggt
gcggacgtcaatcgtcgcctggtggtgatcttcaccgtggcggcggcggttgccggtgtg
gccggtgcgttgctggcccagaccacgcagttcgtcggactcgatgtgctgggtttcccg
cgctcggccgagctgctcatcatcctggtgctgggcggcaccggccgcctctatggcggg
ctggtcggggcgctggtctacatgctggcgcaggattacctgtccgggctcaacccggcc
tactggcaattctggatcggcctgttgctgatcgtgatcgtgctgttcgcacgcggcggg
ctgctggggggattggccgtgctgcgtgacaagttcttcaagggaggtcgcgcatga
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