Herbaspirillum seropedicae SmR1: Hsero_4005
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Entry
Hsero_4005 CDS
T01268
Name
(GenBank) ABC-type branched-chain amino acid transport system, periplasmic component protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_4005
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_4005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4005
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_4005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
CW_binding_2
ExoU_mid_dom
Motif
Other DBs
NCBI-ProteinID:
ADJ65476
UniProt:
D8ISR0
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Position
4592787..4593962
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AA seq
391 aa
AA seq
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MRFKKIALLAVMAASGGLLASLAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG
DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK
PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET
AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE
RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG
AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV
QTVYVRKVEKIGNEAYNVEFDKFENMKDTGK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcaagaagattgcactgctggccgtgatggccgcatcgggcggcttgctggcg
tcgctggcgcaagcccaggaaaccatcaaggtcggactcatcgccgccttctccggcccc
ttcgccgactacggcaagcagatggaaggcggcatcaaggcctacatggcgcagcacggc
gaccaggtggcgggcaagaagatccagatcatcatcaaggacaccaccggtccctcgccg
gagatcgccaagcgcctggcgcaggaactggtggtgcgcgagaaggtggacttcctggcc
ggcttcggcctcacgcccgaagcgctggcggtggcgcccatcgccgagcaggccaagaag
ccgatgatcatcatgaacgccgccacctcggtgatcaccaccaagtccaactacatcgcg
cgcttttcgatgacgctgccgcaggtctccggccccatggcgacctgggcgctgaagaac
ggcatcaagcgggtggtcacgctggtggccgattacggcccgggcatcgacgccgagacc
gccttcaagaccaatctgctgggcggtggcggccaggtgctggaatcgatccgggtgccg
ctgcgcaatcctgaattcgcgccctacatccagcgcatcaaggacgccaagccagaggcg
gtgttcatcttcgtgccggccggcgagcagagcattgccttcatgaagggctatcgcgag
cgcggactggccgaggccgggatcaaggtcatcgccacgggcgatctcaccgatgaccac
gtcatgcccgccatgggcgaatccacgctgggcgtgatcaccaccttccactattcggcc
gcgcatgattcgccggagaacaaggccttcctgaaaagctttgccgctgccaatccgggc
gctggccggcccaacttcatggcggtggcggcctatgatggcatgaacgcgatctacgag
gtcagcaagaaactgaacggcaagatcgacggcgaccgcgccatggccatcctcaagacc
atgaagttcaccagcccgcgcggcccgatcgccatcgacccggccacgcgcgacatcgtg
cagacggtctatgtgcgcaaggtcgagaagatcggcaatgaagcctacaacgtcgagttc
gacaagttcgagaacatgaaggacaccggcaaataa
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