Herbaspirillum seropedicae SmR1: Hsero_4013
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Entry
Hsero_4013 CDS
T01268
Name
(GenBank) ABC-type branched-chain amino acid transport system, permease component protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_4013
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_4013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4013
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_4013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
FecCD
AAA_21
AAA_29
nSTAND_NTPase5
AAA_22
AAA_30
AAA_23
AAA_27
MeaB
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ADJ65484
UniProt:
D8ISR8
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All DBs
Position
4602103..4603896
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AA seq
597 aa
AA seq
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MSMNKRIPLYALLVVLALFPLLPTPQFWVIQANYIGLYALVAIGLVLLTGIGGMTSFGQA
AFVGMGAYTTSYLTTVHGVSPWLTLPVGLFITGVSAYVLGRITLRMSGHYLPLATIAWGI
SLYFLFGKVDFLGKYDGISGIPALQLAGLDLAKERHLYYLIWAIVLAAAWVSLNLLDSRA
GRAIRALKGGRSMAEAMGVDTGRYKILIFVFAALLASVSGWLFAHMQRTVNPSPFSLAMG
IEYLFIVVVGGIAHIWGALLGAGVLKLLSDQLQVLLPALLGDGGSYESIVFGLILILLLK
YAGGGLWPWVRALWLRAFPTAPAPLRVAHATAMDKRAAVARGAPLLEVDQINKRFGGLVA
VNDVSFKVKAGEIVGLIGPNGAGKSTTFNLVTGLLHASGGRVGFNGRDIAGLPARAIARL
GIARTFQHVRLLPGMTVLENVALGAHMRSQQGFLKNTVNAMLHLERAEEQALLDEAARAL
HRVGLQHLMHEQAGNLALGQQRILEIARALCCDPLLLLLDEPAAGLRHLEKQALSKVLQE
LRADGMSILLVEHDMEFVMELTDHIVVMEFGAKIAEGTPQEIARHPAVIEAYLGGIE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaacaaacgaatccctctctacgccctgctggtggtgctggccctgttcccg
ctgctgcccacgccgcagttctgggtgatccaggccaactacatcgggctctacgcgctg
gtggccatcggcctggtgctgctgaccggcatcggcggcatgacctcgttcggccaggcg
gccttcgtcggcatgggcgcctataccacctcctatctcaccaccgtgcatggcgtgtcg
ccctggctgacgctgccggtgggcctcttcatcaccggcgtgtcggcctatgtgctgggc
cgcatcacgctgcgcatgtcgggccactacctgccgctggccaccatcgcctggggcatc
agcctgtacttcctgttcggcaaggtggatttcctgggcaagtacgacggcatctccggc
atccctgcactgcaactggcgggactggacctggccaaggaacgccacctctactacctg
atctgggccatcgtgctggccgcggcctgggtctcgctgaacctgctggattcgcgtgcg
ggccgcgccatccgcgccctcaagggcgggcggtcgatggccgaggccatgggcgtggat
acggggcgctacaagatcctcatcttcgtcttcgccgcgctgctggcgtcggtctcggga
tggctctttgcgcacatgcagcgcaccgtcaatccctcgcccttcagcctggcgatgggt
atcgagtatctcttcatcgtggtggtcggcggcattgcccatatctggggtgcgctgctg
ggcgcgggcgtgttgaagctgctgtcggaccagttgcaggtgctgctgccggcgctgctg
ggcgatggcggcagttatgagagcatcgtcttcggcctgatcctgatcctgttgctgaag
tacgcaggcggcggcctgtggccgtgggtgcgggcgctgtggctgcgcgctttcccgact
gcaccggcgccgctgcgggtggcccatgcgacggcgatggacaagcgcgccgccgtggcg
cgcggggcgccgctgttggaggtggaccagatcaacaagcgcttcggcggactggtggcg
gtcaatgatgtgtccttcaaggtcaaggcgggcgagatcgtcggcctgatcgggcccaat
ggcgcgggcaagtccaccaccttcaacctggtgacgggcctcttgcacgccagcggcgga
cgcgtgggcttcaatggccgcgatatcgccggactgccggcgcgggccatcgcccgcctg
ggcattgcccgcaccttccagcacgtacgcctgctgccgggcatgacggtgctggagaat
gtggcgctgggcgcgcacatgcgcagccagcaaggattcctgaagaatacggtcaacgcc
atgctgcacctggaacgcgccgaagaacaggcgctgctggatgaggccgcacgcgccctg
catcgcgtcggcctgcagcatctgatgcatgaacaggcgggcaacctggcgctgggccag
caacgcatcctggagatcgcccgcgccctgtgctgcgatccgctgctgctgttgctcgat
gaaccggccgcagggctgcgccacctggaaaagcaggccctctccaaggtgctgcaggaa
ttgcgcgccgatggcatgagcatcctgctggtggaacatgacatggaattcgtcatggaa
ctgaccgaccacatcgtggtgatggaattcggcgccaagatcgccgaaggcacgccacaa
gagatcgcccggcatcccgccgtgatcgaagcctacctgggtggaatcgaatga
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