Herbaspirillum seropedicae SmR1: Hsero_4024
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Entry
Hsero_4024 CDS
T01268
Name
(GenBank) ABC-type sugar transport system, periplasmic component protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_4024
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Hsero_4024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4024
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Hsero_4024
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ADJ65495
UniProt:
D8ISS9
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All DBs
Position
complement(4614091..4615200)
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AA seq
369 aa
AA seq
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MCRMSALKANNGDNMNAFVRRRGVGLQLAAIAASTIPLMLAAGSASAQVATGDTSQAKIA
LSNNYAANAWRQSMLKTWAATADDAVKRKLVAAAPAFTTSENQPTEQAQQIQNLILQGYK
AIVVDAASPTALNGTIKKACAAGVVVVSYDGVVTEPCAYRVTFDFRKMGERQIDYLAERL
NGKGNILEIRGLAGVSVDGEIHAGIMDGLKKHPGLKVVGSVNGDWAQTVAQKAVAGILPT
LPKIDGVVTQGGDGFGVAQAFKAANRELPIIILGNREDELQWWKTQIPSGYKTYSASNPP
GAVTVAFWVAQQVLAGKKIPKDVDIVAPLLYLTAEQLPEALAKTPQGGVADIGFSQADTV
KLLDAPKSK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggatgtccgctttgaaagccaacaacggagacaatatgaacgcatttgtacgg
cgccgcggcgtcgggctgcagctcgcggccatcgcagccagcaccatccccctcatgctc
gccgctggctctgccagcgcccaggtcgccaccggcgacacctcgcaagccaagattgcg
ctgtccaacaactatgctgccaacgcctggcgtcagtccatgctcaagacctgggcggcc
accgccgatgatgcggtcaagcgcaagctggtggcggccgcgcctgccttcaccacctcc
gagaaccagcccaccgaacaggcccagcagatccagaacctgatcctgcagggctacaag
gccatcgtggtggatgcggcgtctcccaccgctctcaatggcaccatcaagaaagcctgc
gctgcgggcgtggtagtggtgtcctatgacggcgtggtcaccgaaccctgcgcctatcgc
gtcaccttcgacttccgcaagatgggcgagcgccagatcgattacctggccgagcgcctc
aacggcaagggcaacatcctcgaaatccgcggcctggccggtgtctccgtggatggtgaa
atccatgccggcatcatggatggcctcaagaagcatccgggcctgaaggtagtgggttcg
gtcaatggcgactgggcccagaccgtggcgcagaaggccgtggccggcatcctgccgacc
ctgcccaagatcgacggcgtggtcacgcagggcggtgacggcttcggcgtggcgcaagcc
ttcaaggccgccaaccgcgagctgcccatcatcatcctgggcaatcgcgaagatgagctg
caatggtggaagacccagatccccagcggctacaagacctattcggcctccaacccgccc
ggcgcggtgacggtggccttctgggtggcgcagcaggtgctggccggcaagaagatcccc
aaggatgtcgatatcgtcgcgccgctgctctacctgaccgcagagcagttgcctgaggcc
ctggccaagaccccgcagggcggcgtggccgacatcggtttctcccaggccgataccgtc
aagctgctcgacgcacccaagtccaagtaa
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