Herbaspirillum seropedicae SmR1: Hsero_4029
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Entry
Hsero_4029 CDS
T01268
Name
(GenBank) lipoprotein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4029
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_4029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
BON_like
Ribosomal_S6e
Beta-barrel_ALG44
Motif
Other DBs
NCBI-ProteinID:
ADJ65500
UniProt:
D8IST4
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All DBs
Position
4624137..4624940
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AA seq
267 aa
AA seq
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MKTNILSLFYRLALSAVCLSCTTSDAQNLAPPVATPAPGQVLVTGTVPDEASKAAALTRL
RELYGHDRVVDQISVGPVVLPANWNNHVQKLISPNLKAVRQGQLKIDGTNVSISGEVSHE
AQRQQIASDMATSLNSSYIINNGLRVSTSEQGVLDNTLANRVVSFESGRATLTPEGKRIL
DEIAATMLQLKGRRVEIIGNTDNEGLRASNISLSLARADAVKAYLSTKGVDDSLLTTSGQ
GPDRPVASNATSEGRARNRRIEFRIAK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgaacattctctcccttttctatcggctggcgttgagcgcggtctgcttgtcc
tgcaccacaagcgacgcgcaaaacctcgccccgcccgtggccaccccagcaccgggccag
gttctggtcaccggaactgtcccggacgaagccagcaaagcagcagcgctgacgcgcctg
cgcgaactctacggtcacgaccgggtggtagaccagatttcggtcggcccggtggtcttg
cccgccaactggaacaaccatgtgcagaaactgatctcacccaacctcaaggcggtcaga
cagggccaattgaagatcgacggcaccaacgtgagcatctcgggtgaagtctcccatgaa
gcgcaacgccagcagatcgccagcgacatggccaccagcctcaattcatcctatatcatc
aacaatggcttgcgcgtctcaacgtctgaacaaggagtgctggacaacaccctggccaat
cgcgttgtgtccttcgagagcgggcgcgccacgctcacccctgaaggcaagcgcatcctc
gatgaaatcgctgcgaccatgttgcagctcaaaggtaggcgcgtcgagatcatcggcaat
actgacaacgaaggcctgcgagcaagcaacatctcgctttctctggcccgcgcagatgcg
gtcaaggcttacctgagcaccaagggcgtcgatgacagtcttctgaccacgtctggccaa
ggtccggatcgccctgtggcatccaatgccacatccgaaggacgcgccaggaatcgccgg
atcgagttccggatcgccaagtaa
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