KEGG   Herbaspirillum seropedicae SmR1: Hsero_4030
Entry
Hsero_4030        CDS       T01268                                 
Name
(GenBank) conserved hypothetical protein
  KO
K11902  type VI secretion system protein ImpA
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hse02044]
    Hsero_4030
Secretion system [BR:hse02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Hsero_4030
SSDB
Motif
Pfam: ImpA_N DUF7577
Other DBs
NCBI-ProteinID: ADJ65501
UniProt: D8IST5
LinkDB
Position
complement(4625023..4626150)
AA seq 375 aa
MKLPTLKSALGTKLPTTVIDVLLKPISNEHPGGEDLSFTTDLDAIAQARRFDDPTLDQGE
WVTDIKEADWSFVEQRCAQLIETRSKDLRLAVWYGEAACKTRGLRGLGDGFLLMAGLFDQ
FWDHLYPLSEDGDHDRRVGNLTWLLSRSVQMSHEIPLTEGRGSAFSLFDFNSARTRAANA
ERIVNEGGLPEEGVKLAVMESARKRSSHAFYEAMLEDAQYCRHCLEQLENIVDHRLGVDG
PGFSAAREATKLVHDTIVRFAAETGLRSAVSAESILIDGDDAAVAAQLTGSGGSASAVLQ
HQGPIRTRAEAIGQLRAVAEFFRRSEPHSPVAHLADKAAQWGEMPLHAWLRTVIKDGAAL
SHVEELLGLQAPQQD
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgaaactaccgaccttgaaatccgcgctgggcaccaagctgcccactaccgtcatcgac
gtgctgctcaagcccatcagcaatgagcaccccggcggcgaagacctgtccttcacaacc
gacctggacgctattgcccaggcgaggcgtttcgatgacccgaccttggaccaaggggaa
tgggttaccgacatcaaggaagccgactggagtttcgtcgagcagcgttgcgcccagctc
atcgaaacccgtagcaaagacttgcgtctggccgtctggtacggcgaagcggcttgcaag
acccgtggcctgcgcggcttgggggatggatttctgttgatggccggtctgttcgatcag
ttctgggatcatctctacccgctttcggaagatggcgaccacgaccgtcgcgttggcaac
ctgacctggttgttgtctcgatcggtgcaaatgtcgcacgagatcccgctgaccgaggga
cgcggtagcgccttctccctgttcgatttcaacagcgcccgcacccgtgccgccaatgcc
gagcgcatcgtaaacgaaggcggcctgccggaagagggcgtcaagctagccgtgatggaa
tcggcccgcaagcgcagctcgcacgcgttctatgaagctatgctggaagatgcccaatac
tgtcgccattgccttgagcaactcgagaatatcgtggaccaccgtcttggtgtcgatggt
cccggcttcagtgccgcacgtgaagcaaccaagctggtacatgacaccattgtccgtttc
gctgctgagaccgggctgcgttcggcggtttcagcagagagcatcttgattgacggggac
gatgccgcagtggctgcacagttgacgggatccggtggctccgcctcagccgtgcttcag
catcaagggccgatccgtacccgagctgaagccatcgggcaactgcgggccgtagctgag
tttttccgccgcagcgaaccgcatagtccggtagcgcatctggctgacaaggccgcgcag
tggggggaaatgcccttgcatgcctggctcaggaccgtgatcaaggacggtgccgccttg
tctcatgtcgaggaattactgggattgcaggcgccacagcaggattga

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