Herbaspirillum seropedicae SmR1: Hsero_4079
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Entry
Hsero_4079 CDS
T01268
Name
(GenBank) ABC-type transport system involved in resistance to organic solvents, ATPase component protein
KO
K02065
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_4079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4079
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
Hsero_4079
Phospholipid transporter
Hsero_4079
Mce system transporter
Hsero_4079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND_NTPase5
AAA_22
Zeta_toxin
AAA_19
ATPase
AAA_29
AAA_14
PRK
AAA_18
AAA_16
AAA_30
APS_kinase
RsgA_GTPase
nSTAND3
DLIC
AAA_23
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ADJ65549
UniProt:
D8ITB9
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All DBs
Position
complement(4670820..4671551)
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AA seq
243 aa
AA seq
DB search
MDFPRGKVVAVMGGSGSGKTTILRLIGGQLRPQQGKVEVDGENVPDLATKQLFLLRRKMG
MLFQNGALFTDMTVFDNVAFPLREHTDLDETLIRDLVLMKLNAVGLRNAASLKPAEISGG
MARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLIRRLNDALGSTSILVSHDVNES
FAIADHVYFLSAGKIVAQGTPEELRSSTDPYVRQFVHAEADGPVPFHYPGKSLAEDLGLG
GGA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggatttcccgcgcggaaaggtggtggcggtgatgggcggttccggttcgggcaagacc
accatcctgcgcctgatcggcggccagttgcgtccgcagcagggcaaggtggaagtggat
ggcgaaaacgtccccgacctggccacgaagcaactcttcctgctgcgccgcaagatgggc
atgctgttccagaacggcgccttgttcaccgacatgacggtgttcgacaacgtggccttc
ccgctgcgcgagcataccgatctggacgagacgctcatccgcgacctggtgctcatgaag
ctcaacgccgtgggcctgcgcaatgccgcttcgctcaagccggccgagatctccggcggc
atggcgcgccgcgtggcgctggcgcgcgccatcgcgctggacccggcgctgatcatgtat
gacgagcctttcgccggcctcgatcccatctccatgggcgtgaccgccaacctgatccgc
cgtctcaatgacgcgctgggttcgacctcgatcctggtgtcgcacgacgtgaacgagtcc
tttgccatcgccgaccatgtctatttcctgtcggccggcaagatcgtggcgcagggcacg
cccgaagaactgcgttcttccaccgacccctacgtcaggcagttcgtgcatgccgaggcc
gatggtccggtgccattccactatcccggcaagtcgctggccgaggacctgggcctggga
ggtggcgcatga
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