Herbaspirillum seropedicae SmR1: Hsero_4150
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Entry
Hsero_4150 CDS
T01268
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor protein
KO
K03089
RNA polymerase sigma-32 factor
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hse03021
]
Hsero_4150 (rpoH)
Transcription machinery [BR:
hse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Hsero_4150 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ADJ65620
UniProt:
D8ITJ0
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All DBs
Position
4751945..4752844
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AA seq
299 aa
AA seq
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MKTASAQTALMPAESNALALGFSGSLGNIDAYISAVNRLPMLTHEEEVKLARDLREKNDL
GAAQKMVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPAQNVRLVSYAMH
WIKAEIHEYILKNWRLVKVATTKAQRKLFFNLRSHKEGLDAMTPAQVEALAKTLDVKREE
VIEMETRLSGRDIALESPTDDEDDKFAPIAYLSSDNSEPTRVIEAKQYDRLQSEGLEAAL
SKLDERSRRIVEARWLANDDGSGATLHELADEFGVSAERIRQIEAVALKKMKTSLQAYS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgcgtctgcacaaactgcactcatgcctgccgagtccaatgcactcgcgctg
ggtttttccggcagcctgggcaacatcgacgcgtatatctcggcagtgaaccgcctgccc
atgctgacccacgaggaagaggtcaagctggcccgcgacctgcgcgaaaagaacgatctg
ggcgccgcccagaagatggtgttgtcgcacctgcgcctggtggtctcgatcgcccgtggc
tacctgggctacggcctgccgcacgccgacctgatccaggaaggcaatatcggcctgatg
aaggccgtcaagcgcttcgacccggcccagaacgtgcgcctggtgtcctatgccatgcat
tggatcaaggccgagatccacgagtacatcctgaagaactggcgcctggtcaaggtggcg
accaccaaggcccaacgcaagctgttcttcaacctgcgcagccacaaggaaggtctggac
gcgatgacgccggcccaggtcgaggccctggccaagaccctggacgtcaagcgcgaggaa
gtgatcgagatggaaacccgtctgtccggtcgcgacatcgccctggaatcgcccaccgat
gatgaagatgacaagttcgcgcccatcgcctacctgtcgtcggacaattcggagccgacc
cgcgtgatcgaggccaagcagtacgaccgcctgcagtccgaaggcctggaagccgcactg
tccaagctggatgagcgctcgcgccgcattgtcgaggcccgctggctggccaatgacgat
ggctccggggcgacgctgcacgagctggctgacgagttcggcgtctcggccgagcgtatc
cgccagatcgaggcggtggcgctgaagaagatgaagacctcgcttcaggcctattcctga
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