Herbaspirillum seropedicae SmR1: Hsero_4180
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Entry
Hsero_4180 CDS
T01268
Name
(GenBank) hypothetical protein
KO
K02662
type IV pilus assembly protein PilM
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hse02044
]
Hsero_4180
02035 Bacterial motility proteins [BR:
hse02035
]
Hsero_4180
Secretion system [BR:
hse02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Hsero_4180
Bacterial motility proteins [BR:
hse02035
]
Pilus system
Pilus assembly proteins
Hsero_4180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilM_2
Motif
Other DBs
NCBI-ProteinID:
ADJ65650
UniProt:
D8ITM0
LinkDB
All DBs
Position
4781509..4782639
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AA seq
376 aa
AA seq
DB search
MEETSPHYSGSPLWAAWAGVANRPNPLRPGSGPPWRNRPYCRDLGRFLKFWRFPHRLAHL
TIPLPSHDEVSAMTWTPLRCLRPRLCIGLDLAPQRLRLALARRRGRQREVLRLAQAALPD
GLLQDGQITDLDAVVQACRPLLDPACPAQAALVLGMPRTCLSVQRLVLPAGSSDWERLAQ
VRAEMSAYGLAPADHVMDYRVAPARAGQDVSLWAWAASSLAVEDRLALAAALHRPLAALP
PEDECLGDFLRPAASAAHDALLHLDPDDSWLIYGDTPAQGLRWRPAVAGPTALLAELAPL
LRPKPQRLLLDCHPAALPTHDALPMLRAAFARYAGLRALPAPLPADLILAPSARLPGANP
VGSFHLAIALAWRGLA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaacaagcccgcattatagcggctcgcccctgtgggccgcgtgggcgggtgtt
gcaaatagaccaaacccgctcaggccgggttccgggccgccctggcggaataggccgtac
tgccgtgatttgggccgctttctcaagttttggcgattcccgcatcggcttgcccatctg
acaatcccccttccttcccacgatgaggtcagcgccatgacctggactccccttcgctgc
ctgcgcccgcgcttgtgcatcggcctcgacctggccccgcagcggctgcggctggcactg
gcgcgccgccgtggacgtcagcgcgaagtgctgcggctggcgcaggctgcgttgcccgac
gggttgctgcaggacggccagatcaccgatctcgacgcagtggtgcaagcctgtcgtccg
ctgctggacccagcctgtcccgcccaggcagcgctggtgctgggcatgccgcgcacctgc
ctgagcgtgcagcggctggtcctgcccgccggctcgagcgattgggaaaggctggcgcag
gtccgcgccgaaatgagcgcctacggcctggcccccgccgaccacgtgatggactatcgc
gtcgcccctgcccgggccggccaggatgtgagcctatgggcctgggccgcctcctcgctg
gcggtggaagaccggctggcgctggccgcagcgctgcaccggccactggccgcgctgccg
cccgaggatgaatgcctgggcgacttcctgcggccagccgccagcgcagcccacgacgcc
ctgctgcatctggatcccgatgacagctggctgatctacggcgacacacccgcccaggga
ttgcgctggcgtcctgccgtcgccggcccgactgcgctgctcgccgaactcgcccccttg
ctcaggcccaagccgcaacggctgctgctggactgccatcctgccgcactcccgacccat
gacgccctgcccatgctgcgcgctgcattcgcacgctatgccggcttgcgcgccctgcct
gcgccgctcccggctgacctgatcctggcgccatcggcgcgactgccaggggcaaaccca
gtaggcagtttccacctggccattgcgctggcctggagagggctggcatga
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