Herbaspirillum seropedicae SmR1: Hsero_4197
Help
Entry
Hsero_4197 CDS
T01268
Symbol
wecE
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K13017
UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:
2.6.1.98
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00520
Amino sugar and nucleotide sugar metabolism
hse00541
O-Antigen nucleotide sugar biosynthesis
hse01100
Metabolic pathways
hse01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Hsero_4197 (wecE)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Hsero_4197 (wecE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hse01007
]
Hsero_4197 (wecE)
Enzymes [BR:
hse01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.98 UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase
Hsero_4197 (wecE)
Amino acid related enzymes [BR:
hse01007
]
Aminotransferase (transaminase)
Others
Hsero_4197 (wecE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
ComK
Potassium_chann
Motif
Other DBs
NCBI-ProteinID:
ADJ65666
UniProt:
D8ITN6
LinkDB
All DBs
Position
4802110..4803210
Genome browser
AA seq
366 aa
AA seq
DB search
MSQKIDFIDLKSQYRALKDAINSRIQKVLDHGQYIMGPEVRELEAALEAYTGAKHCITVA
SGTEALLISLMALDIKPGDEIITTPFTFVATAEVMVLLGAKPVFVDVEPDTGNIDVRLIE
ARITSKTKAIMPVSLYGQAADMDEINAIAARHGNLPVIEDAAQSFGATYKGRKSGNLSSI
GCTSFFPSKPLGCYGDGGAIFTNDDAIALACRQIRVHGQSQRYVHTRVGVGGRMDTLQCA
IVLAKLERFDWEIEQRLALGSRYNSLLDAAGIARIQQRPDRDSVFAQYTVLLDNREAVQA
ALQNAGIPTAVHYPVPLNRQPAYRHLGDPDQTPVADQLAARVMSLPMSPDLEHTAQDSIV
AALRSI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaagatcgacttcatcgaccttaaatcccaatatcgcgccctgaaggatgcg
atcaattcgcgcattcagaaagtgctggatcacggtcagtacatcatggggccagaagtt
cgagagctggaagctgcgctggaagcatataccggggctaaacattgcattaccgttgca
agcggtacagaggcgctcctgattagcctgatggcgctcgacatcaagcccggcgatgaa
atcatcaccactcctttcaccttcgttgccaccgctgaagtcatggtgctcttgggcgcc
aagccggtgttcgtggatgtggagccggatacgggcaatatcgacgtccgcctgatcgaa
gccaggatcacctccaagacaaaagcaatcatgcccgtaagcctgtacggccaggctgcg
gatatggacgaaatcaacgccattgcggcgcgccacggcaatctccccgtcatcgaggat
gccgcgcagagcttcggagcgacctacaagggacgcaagagcgggaatctgtccagcata
ggatgcaccagtttcttcccaagcaagccgttgggatgctatggagacggcggagcgatt
tttaccaatgacgatgcaatcgccctcgcttgccgtcaaatccgcgtccacgggcagagt
cagcgctacgtccatacgcgcgttggcgtaggtggtcgcatggataccctgcaatgtgcc
attgtactagccaaactcgaacgttttgactgggagattgaacaacgccttgccctgggc
agccgctacaattcgctcctcgatgcggcaggaatcgcgcgcatccaacagcgcccggac
cgcgacagcgtatttgctcaatacactgtgctgctcgacaatcgtgaagcagtgcaggca
gcgttgcagaatgcaggaattccaaccgcggtgcattacccggtcccgctgaaccgacaa
ccagcgtacaggcatctcggcgatcccgaccagactccagtagcggatcaacttgccgcc
cgggtaatgtcgctgccgatgtcaccggatcttgagcacaccgcgcaagattccatcgtt
gctgcgctgcgcagcatataa
DBGET
integrated database retrieval system
