KEGG   Herbaspirillum seropedicae SmR1: Hsero_4218
Entry
Hsero_4218        CDS       T01268                                 
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase protein
  KO
K00067  dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse00521  Streptomycin biosynthesis
hse00523  Polyketide sugar unit biosynthesis
hse00541  Biosynthesis of various nucleotide sugars
hse01100  Metabolic pathways
hse01110  Biosynthesis of secondary metabolites
hse01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:hse00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    Hsero_4218 (rfbD)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    Hsero_4218 (rfbD)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    Hsero_4218 (rfbD)
Enzymes [BR:hse01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     Hsero_4218 (rfbD)
SSDB
Motif
Pfam: RmlD_sub_bind Epimerase GDP_Man_Dehyd NAD_binding_4 DapB_N Semialdhyde_dh NAD_binding_10 Polysacc_synt_2 NmrA NAD_binding_3 Ldh_1_N GFO_IDH_MocA DXP_reductoisom
Other DBs
NCBI-ProteinID: ADJ65687
UniProt: D8IUF5
LinkDB
Position
4825124..4825981
AA seq 285 aa
MKVLVLGASGMIGRTMFHVLSQRPGWEVCAIVRAKTFEVGAPVVTGIDLSNQDHMERLFA
QRRPDVVVNCAGLTKHLPEGNAHIPALTMNALLPHRLAQLCDIADARLIHVSTDCVFSGD
AGNYKEQDTPDATDVYGRTKALGEVTAGNALTLRTSTIGHEHGTQFGLLEWFLAQTQCKG
FRHAIFSGLPTVEFARVVRDIVIPDSSLKGLYHVGASPIDKLSLLQTIARVYKRDIAITV
DEEFRIDRSLNADKFAAATGYRAPAWPVLIEAMYEDHTSRKQSNV
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaaagtactggttctcggcgccagcggcatgatcggccgcaccatgttccacgtccta
tcgcaacgtcccggatgggaagtctgtgcaatcgtgcgcgcaaagacatttgaggttggg
gcaccggttgtgacaggcatcgacctgagcaaccaagatcatatggaacgtctctttgcc
cagaggcgcccggatgtcgtggtgaactgcgcgggcctgacgaagcatttgcccgagggc
aatgcccacatcccagcccttaccatgaatgccctgctcccgcatcgtcttgctcaactg
tgcgacatcgccgatgcgcggctgatccacgtgagcacggactgcgtgttttcaggcgac
gctggcaactacaaggagcaggacacgcccgacgccactgacgtatatggcaggaccaaa
gcgctgggcgaagtgacagctggcaatgcgctcaccctgcgcacttccaccatcggacac
gagcatggcactcaattcggcctgctggaatggttcctggcccagacccagtgcaaggga
ttccggcatgccatcttctcaggattgccaacggtagaattcgcgcgcgtggtgagggat
atcgtcatcccggattcctcactgaaggggctatatcatgttggcgccagccccatcgat
aaactcagcctgttacagacaatcgcacgcgtttacaagagggacattgccatcacagtc
gatgaagagttccggattgaccggagcctgaatgccgacaaatttgcggcagcgactgga
tatcgggcaccagcctggccggtactgatagaggcaatgtacgaagaccacacttccagg
aagcaatccaatgtttga

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