Herbaspirillum seropedicae SmR1: Hsero_4240
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Entry
Hsero_4240 CDS
T01268
Name
(GenBank) AraC family transcription regulator protein
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_4240
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Hsero_4240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ADJ65709
UniProt:
D8IUH7
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All DBs
Position
4845823..4846719
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AA seq
298 aa
AA seq
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MATLYASLVEHDPDRLDAAVTALRVHTSQDERETPLHSHRKGQLVVALRGAVTCETAQGM
WIVPPQSAVWIPPGVPHSNRVTLDGQLCFLFIAPQAASMPEQCCTLALSPLLVQMICHLA
EQRQDYAPHERTARLAAVLVEELEHSQRHALPLHLPAPQHSRLRAIARHLAEHPADRRTV
AQWGQRHAMSERSFARFVQAETGMSFGRWRRQIHLMLALQRLASGSSVQRVSQDLGYDSV
SAFITMFRKTLGKPPARYMAQRQAQRQAPPAVPPPSVPPAHAAAPYFQPTRQASWKPN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctacgccagcctggtcgaacacgatccggaccgcctcgacgccgcggtc
acggccttgcgcgtccacaccagccaggacgagcgcgaaacgcccttgcacagccatcgc
aagggccagctggtggtggccttgcgcggcgcggtcacctgcgagacggcgcaaggcatg
tggatcgtgccaccgcagtcggcggtgtggattccgccgggggtgccgcacagcaaccgc
gtcacgctggatggccagttgtgcttcctcttcatcgccccacaggcggccagcatgccg
gagcagtgctgcaccctggcgctgtcgcccctgctggtgcagatgatctgccacctggcc
gagcagcgccaggactacgccccgcacgaacgcaccgcgcggctggcggcggtgctggtg
gaggaactggaacacagccagcgccacgccctgcccttgcacctgccggcgccgcagcat
tcgcgcctgcgcgccatcgcgcgccacctggccgagcatccggctgatcgcagaacggtg
gcgcaatgggggcagcgtcacgcgatgagcgaacgcagctttgcacgcttcgtgcaggcc
gagaccggtatgagcttcggccgttggcggcgtcagatccacctgatgctggcattgcag
cggctggcctcgggcagctcggtgcaacgcgtctcgcaagacctgggctatgactcggtg
agcgccttcatcaccatgttcaggaagaccctgggcaagccgcccgcgcgctatatggcg
caacggcaggcacaacggcaggcgccccctgcggttcctcccccctccgtgccgcctgcc
cacgcagcggcgccctacttccaaccgacacggcaagcctcatggaaaccgaactga
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