Herbaspirillum seropedicae SmR1: Hsero_4285
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Entry
Hsero_4285 CDS
T01268
Symbol
slt
Name
(GenBank) soluble lytic murein transglycosylase precursor transmembrane protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hse01011
]
Hsero_4285 (slt)
Enzymes [BR:
hse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Hsero_4285 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
hse01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Hsero_4285 (slt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_6
GST_C_7
TPR_4
Motif
Other DBs
NCBI-ProteinID:
ADJ65754
UniProt:
D8IUM2
LinkDB
All DBs
Position
complement(4902614..4904614)
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AA seq
666 aa
AA seq
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MSMRPKNHPFKQRLRALVASMALPLALAGVAAFALAPAAQAQKRLAADAAPDDIFLALRQ
AAATDNAALAQDLASRLSGYELASYVDYYRLKPRVRDYSASEQEIRDFLARWDGQAIVDR
LRNDWLLALGKTGNWAVFDEQYPKFVLNDDTQVKCFALNSRALKGENVAEEARALLTNPK
DYGQGCSDLIATLAQNGQFSQADVWFQIRQAAENGNATVARRAAVLVDSGDVSVTQVMDR
PALMLAKGPGKGVANHQLYIIALGRIAKSNPAQAATYLNDAGRNLTSQEAAQAWAQIALA
ASYKLAPEASDYWRRAKDTPLTQDAMQWKVRMALRDGDWKTVRRTIEAMPAPLRSDTAWV
YWLGRALKEDGQHDAARRLFESIAPNFSFYGQLALEELGQKITIPPGPTPPGAGEVALYS
QNAGFKRSLKFYQLNLRFEAIREWNWELRNMTDRQLLAAAEYARQNDVLDRMVNTSDRTK
SEFDFTQRFPAPHLPEMNAATKPLGMENAWVYGLIRQESRFIKSARSHVGASGLMQLMPA
TAKFVARKIGMSEFTADQVNDINTNLLLGTSYLDMVLNNLEGSETLATAGYNAGPGRPRT
WRATLPRTVEGAIFAEIIPFNETRGYVKNVMSNATYYAAMFENRPQSLKQRMGTVAPNSN
VATDLP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcgtccgaagaatcatccgttcaagcagcgcctgcgcgcgctggtcgcctcc
atggcgctccccctggccctggcaggcgtggccgcgttcgccctcgcacccgctgcccag
gcgcagaagcgtctggctgcggacgccgcacccgacgacatcttcctggccttgcgccag
gccgccgccaccgacaatgcagcgctggcgcaagacctggcgtcgcgcctgtcgggctat
gaactggcgtcctatgtcgattactaccgcctcaagccgcgcgtgcgcgactacagcgcc
agcgagcaggagatccgtgatttcctggcccgctgggacggccaggccatcgtcgatcgc
ctgcgcaatgactggctgctggccttgggcaagaccggtaactgggccgtcttcgatgag
caatatcccaagttcgtgctcaacgacgatacccaggtcaagtgcttcgcgctgaattcg
cgcgccctcaagggcgagaacgtggccgaggaagcgcgcgccctgctcaccaatcccaag
gattacggccagggctgcagcgacctcatcgccaccctggcgcagaacgggcagttcagc
caggccgatgtgtggttccagatccgccaggccgccgagaacggcaacgccaccgtagcc
cgtcgcgccgccgtgctggtcgatagcggcgatgtcagcgtgacccaggtgatggaccgt
ccggcgctgatgctggccaaggggccaggcaagggcgtggccaaccaccagctctacatc
atcgcgctgggccgcatcgccaagagcaatccggcccaggccgccacctatctcaacgac
gccgggcgcaacctcacctcgcaggaagccgcccaggcctgggcgcagatcgccctggcg
gcttcctacaagctggcgccggaagcctcggattactggcgccgcgccaaggatacgccg
ctcacgcaagacgccatgcagtggaaggtccgcatggccctgcgtgatggcgactggaag
accgtgcgcaggaccatcgaagccatgcccgcgccgctgcgcagcgataccgcctgggtc
tactggctgggccgcgcactcaaggaagacggccagcatgacgccgcccgtcgcctgttc
gaatccatcgcgcccaacttcagcttctatggccagctggcgctggaagagctgggccag
aagatcaccattccacccggcccgaccccgcccggtgcgggcgaagtggccctgtattcg
cagaatgccggcttcaagcgttcgctcaagttctaccaattgaacctgcgcttcgaagcc
atccgcgaatggaactgggaactgcgcaacatgaccgaccgtcagctgctggccgcggcc
gaatacgcccgccagaatgatgtgctggaccgcatggtcaacacctccgaccgcaccaag
agcgagttcgatttcacccagcgcttccccgcgccgcacctgccggagatgaacgccgcc
accaagccgctgggcatggagaacgcctgggtctatggcctgatccgccaggaatcgcgc
ttcatcaagtcggcccgctcgcatgtgggcgcgtccgggctgatgcagttgatgccggcc
accgccaagttcgtcgcccgcaagatcggcatgagcgaattcaccgccgaccaggtcaac
gacatcaacaccaacctgctgctgggcaccagctatctcgacatggtgctgaacaacctg
gaaggttcggagaccctggccaccgccggctacaatgccggccccggccgtccgcgcacc
tggcgtgcaaccctgcccaggacggtggaaggagcgatctttgcggagatcattcctttc
aatgaaacccggggctatgtcaagaacgtgatgtccaatgcgacttactatgcggccatg
ttcgagaaccgtccgcaatcgctgaagcaacgcatggggaccgtggcgcccaattccaac
gtcgccaccgacctgccctga
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