Herbaspirillum seropedicae SmR1: Hsero_4297
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Entry
Hsero_4297 CDS
T01268
Symbol
xerC
Name
(GenBank) site-specific integrase/recombinase protein
KO
K03733
integrase/recombinase XerC
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hse03036
]
Hsero_4297 (xerC)
Chromosome and associated proteins [BR:
hse03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Hsero_4297 (xerC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Hda_lid
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ADJ65766
UniProt:
D8IUN4
LinkDB
All DBs
Position
4916495..4917487
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AA seq
330 aa
AA seq
DB search
MEHNVENATTGLIGQYLSFLRTQRKLSDHTVEHYGRDLQELRSLLAPAGEEHADIDLRKT
TQVQIRKCAARLHARGLNARSIARKLSAWRGFFGWLSMQMDLAANPVDGVKAPKKSKPLP
KALAADDAIRLVSQPDPVRDPDSTLAACNRAMFELLYSSGLRVSELVGIDVADVREGGYE
SAGWVDLEEAEVTVTGKGGKKRKVPVGQAARAALADWLPLRARLRKADGGPDSHALFLNE
RGARISPRVAQLRLKAHGRALEMASDVHPHMLRHSFASHVLQSSGDLRAVQEMLGHASIT
ATQVYTALDFQRLAQVYDQAHPRARKNGGK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggagcacaacgtggaaaacgcgaccacaggcctgatcggacaatatctctccttcctg
cgcacgcagcgcaagctctcggaccataccgtcgaacactacgggcgcgacctgcaggag
ctgcgctccctgctggccccggccggcgaggaacatgccgacatcgacctgcgcaagacg
acccaggtacagatccgcaaatgcgccgcccgcctgcatgcgcgtggcctcaacgcccgc
tccattgcacgcaagctgtcggcctggcggggatttttcggctggctgtcgatgcagatg
gacctcgcggccaacccggtcgatggcgtcaaggcccccaagaaaagcaaacccctgccc
aaggccctggccgccgatgacgctatccggctggtctcccagcccgatcccgtgcgcgat
cccgattccaccctggcggcctgcaaccgggccatgttcgaactgctgtattcgagtggc
ctgcgggtctcggagctggtgggaatcgatgtggccgatgtgcgcgagggcggctacgaa
tctgccggctgggtcgacctggaagaagccgaagtgaccgtgaccggcaagggcggcaag
aagcgcaaggtcccggtgggccaggccgcccgcgctgccctggccgactggctgcccttg
cgggccaggctgcgcaaggccgacggcgggcccgacagccacgccctgttcctcaatgaa
cgcggcgcgcgcatctcgccgcgggtggcgcagttgcggctcaaggcccacggccgggcg
ctggaaatggccagcgacgtccatccccatatgctgcgtcactcctttgcctcgcatgta
ctgcaaagctcgggcgacctgcgcgccgtgcaggaaatgctgggccacgcttccatcacc
gctacccaggtctatacggcgctggatttccaacgcctggcccaggtctacgaccaggcc
catccgagggcgcgcaagaacggcggcaagtag
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