Herbaspirillum seropedicae SmR1: Hsero_4328
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Entry
Hsero_4328 CDS
T01268
Symbol
dinP
Name
(GenBank) nucleotidyltransferase/DNA polymerase involved in DNA repair protein
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hse03400
]
Hsero_4328 (dinP)
Enzymes [BR:
hse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hsero_4328 (dinP)
DNA repair and recombination proteins [BR:
hse03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
Hsero_4328 (dinP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
HHH_5
POLH-Rev1_HhH
IMS_HHH_1
Cdd1
DNA_pol_lambd_f
DUF4332
SAM_BAF
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
ADJ65797
UniProt:
D8IUR5
LinkDB
All DBs
Position
4952877..4954031
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AA seq
384 aa
AA seq
DB search
MANDRRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAG
RGVVTTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLI
EDRGIDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNG
LTILTPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLAGAAPDLLRAHFGRSYA
EWLGRVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDR
KGYVGRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRV
GALSKKDEQAAASHAVQAELPFAS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaccgccgcatcgcccacctcgacatggacgccttctatgcctcggtggaa
ctgctgcgctatcccgacctgcgcgggcaggctgtggtcatcggcggtggttcagccacc
cgtccggtggagctgcccgacggcacgcgccagtatttccgcatgcgcgactatgccggg
cgcggcgtggtcaccacctccacctacgaagcgcgcgccctgggcgtcttctcggccatg
ggcatcatgaaggcggcccagctggcgccggacgccatcctgctgccgaccgacttcgag
gcctatcgcaaatactcacggctgttcaaggaagcggtgcgcaacattgcaccgctgatc
gaggaccgcggcatcgatgagatctacatcgatctctcggcctggtccgacaccgcccct
gaggtggcgcggcagatcaaggacgccgtgcatgcggccacctcgctgacctgctccatc
ggcgtggcgcccaacaagatgctggccaagatctcttccgagctggacaagcccaacggc
ctgaccatcctcacccccgccgacatcgaacgccgcatctggccgctgccggtgcgcaag
atcaatggcatcggccccaaggccgccgaaaagctcagcgcgctgggcatcgacaccgtg
gccgacctggcgggtgcagcgccggacctgctgcgcgcccactttggccgcagctatgcc
gaatggctgggccgcgtggcgcagggcgtcgatgaccggcccgtgcagacctattccgaa
cccaagtccatcagccgcgagaccaccttcgagcgcgacctgcatgcgcgcgccgaccgg
gcgcaactgtcggagatctttaccgcgctgtgcgtgaagctggctgccgacctggaccgc
aagggctatgtcggacgcaccatcggcatcaagctcaagtacgccgacttccgtggcgtc
acccgtgatgtcaccctgccctcgcccaccggcgacgccgccgccatccgccaggccgca
ggcgaatgcctcaagcgcgtgccactggacaagaaactgcgcctgctgggcgtgcgcgtg
ggtgcgctgtcgaagaaggatgagcaggccgccgcaagccatgctgtgcaggcggaactg
ccctttgcttcctga
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