Herbaspirillum seropedicae SmR1: Hsero_4357
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Entry
Hsero_4357 CDS
T01268
Symbol
hemE
Name
(GenBank) uroporphyrinogen decarboxylase protein
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00860
Porphyrin metabolism
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01240
Biosynthesis of cofactors
Module
hse_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Hsero_4357 (hemE)
Enzymes [BR:
hse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
Hsero_4357 (hemE)
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Gene cluster
GFIT
Motif
Pfam:
URO-D
Glyco_hydro_14
Motif
Other DBs
NCBI-ProteinID:
ADJ65825
UniProt:
D8IVL7
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All DBs
Position
complement(4989255..4990349)
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AA seq
364 aa
AA seq
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MSSSSMSTFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRATRARAGSFMGLATN
PDYATEVTLQPLERYPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFQRPLRDEAAVKAL
RAPDLGKLDYVFKAVTQIRRELDGRVPLIGFSGSPWTLACYMVEGGGSDDFRLVKSMLYS
RPDLMHHILRTNADAVAAYLNAQIDAGAQAVMIFDTWGGALADGVYQQFSLSYMQQVVSQ
LKREQGGQQVPVIVFTKGGGLWLEQIAAIGADAVGLDWTVNLGQARQRVGDKVALQGNLD
PNVLFAGDDAIRAEVRKLLESFGRPGAGSGHVFNLGHGISQHTPPEAVTTLVQAVHEFSR
ALRA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcttctatgtccaccttcgctccgctcaaaaacgataccttcctgcgcgcc
ctgttgcgccagcccaccgactacaccccgatgtggctgatgcgccaggccggccgctat
ctgcccgagtaccgcgccacgcgcgcgcgcgccggttccttcatgggcctggccaccaac
ccggattacgccaccgaagtgacgctgcagccgctggaacgttatccgctggacgccgcc
atcctcttctccgacatcctgaccgtgcccgacgccatgggcctgggcctgtacttcgcc
gagggcgaggggcccaagttccagcgtcccttgcgtgacgaggccgccgtcaaggcgctg
cgcgcgcccgacctgggcaagctcgactatgtcttcaaggcggtcacccagatccgccgc
gagctcgatggccgggtgccgttgatcggcttttccggcagtccctggacgctggcctgc
tacatggtcgaaggcggtggttcggatgacttccgcctggtcaagagcatgctctacagc
cgccccgacctgatgcaccacatcctcaggaccaatgccgacgccgtcgccgcctatctc
aacgcccagatcgatgcgggtgcgcaagcggtgatgatcttcgatacctggggtggggcg
ctggccgatggcgtctaccagcaattctcgctgtcctatatgcagcaggtggtcagccag
ctcaagcgcgagcagggtggccagcaggtgccggtgatcgtcttcaccaagggcggcggg
ctgtggctggaacagatcgccgccatcggcgccgacgccgtggggctggactggaccgtc
aacctcggccaggcgcgccagcgcgtgggcgacaaggtggccttgcagggcaacctcgat
cccaacgtgctcttcgccggcgacgacgctatccgcgccgaggtgcgcaagctgcttgag
tccttcgggcgtccgggcgcgggcagcggccatgtgttcaacctcgggcacggcatctcc
cagcacaccccgccggaggcggtcacgaccttggtccaggctgtgcatgaattcagccgc
gccttgcgcgcctga
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