Herbaspirillum seropedicae SmR1: Hsero_4446
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Entry
Hsero_4446 CDS
T01268
Name
(GenBank) ABC-type sugar transport system, ATPase component protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_4446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4446
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
Hsero_4446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
TsaE
Zeta_toxin
AFG1_ATPase
AAA_23
DUF815
DLIC
Motif
Other DBs
NCBI-ProteinID:
ADJ65912
UniProt:
D8IVV4
LinkDB
All DBs
Position
complement(5080575..5082215)
Genome browser
AA seq
546 aa
AA seq
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MSSHVMSIPGTALHPPQAPARSAMRAVADDSTAPVLSLSGIGKRFQGVVALQDVGFTVRP
GEVMALLGENGAGKSTLVKILTGIHQPDEGSIHLGGREVRFASAQDAMRGGITAVHQETV
MFEELSVAENIWIGRQPLCGTPRRIDWRRMEDEARALFARLEVDLPVRARVKDLSVAQRH
FVEIARALSQQAQVVIMDEPTAALSHHEIGELYRIIGQLRRAGTAVIFISHKFDEIYAVA
DRYTVLRDGRFIASGELADITEQQLVALMVGREVGQVFSRAASNTEDQTAPVLEVKHLSH
PSEFDDVSFAVRPGEILGFYGLVGAGRSEVMHALFGLSPEAQGAVWIDGREVKLCSPAQA
IAHGLAYVPEDRQRQGALLSLPIFQNITLPVLPGIGFFLRRHRRREIDIARRLCEQLELK
ASHFHQHVAQLSGGNQQKVVLAKWLATQPRVLILDEPTKGIDIGSKAAVHRFIGELVAQG
LAVILVSSELPEVMGMSDRIVVMHQGRVQQVFSRAEASAEALAAAASGGLHADAATATLA
GEATWH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtcacgtcatgtccatcccagggactgcattgcatcctccccaggcgcctgcg
cgcagcgccatgcgcgccgtcgctgatgacagcaccgcgccggtgctgtccttgtccggc
atcggcaaacgcttccagggcgtggtagcgctgcaggatgtcggcttcacggtgcgcccc
ggtgaagtcatggcgctgctgggcgagaatggcgcgggcaagtccacgctggtcaagatc
ctcaccggcattcatcagcccgacgaaggcagcatccacctgggtgggcgcgaagtgcgc
tttgccagcgcccaggatgcgatgcgcggcggcatcaccgctgtgcatcaggagaccgtg
atgttcgaggaactgagcgtggccgagaacatctggatcggtcgccagccgctgtgcggc
acgccccggcgcatagactggcggcgcatggaggacgaggcgcgcgccttgttcgcccgt
ctcgaagtggacctgccggtgcgcgcgcgggtcaaggacctgagcgtggcgcagcgccat
ttcgtggagatcgcacgggccctgtcgcaacaggcgcaagtggtgatcatggacgaaccc
accgctgcgctgtcgcaccacgagatcggcgagctgtaccggatcatcgggcaactgcgt
cgcgctggcacggcggtcatcttcatctcccacaagttcgacgagatctatgccgtggcc
gaccgctatacggtgctgcgcgatggccgcttcatcgccagcggcgaactggccgacatc
accgagcagcaactggtggccctgatggtgggacgcgaggtcggccaggtgttcagccgc
gccgccagcaacaccgaggaccagaccgcgccggtgctggaggtcaagcacttgtcccac
cccagcgaattcgatgacgtcagctttgccgtgcggcctggcgagatcctgggcttctat
ggactggtcggggccgggcgctcggaggtcatgcatgcgctgttcgggctgtcacccgag
gcgcagggcgccgtctggatcgatggccgcgaggtcaagctgtgctcgcccgcccaggcc
atcgcccatggcctggcctatgtcccggaagaccgccagcgccagggcgccttgctgtcc
ctgccgatcttccagaacatcaccttgccggtgctgcctggcatcggcttcttcctgcgt
cgtcatcgccgccgcgagatcgacatcgcccgccgcctgtgcgaacagctcgaactcaag
gccagccatttccaccagcatgtggcgcagctctcgggcggcaaccagcagaaggtagtg
ctggccaagtggttggccacgcagccgcgcgtgctgatcctggatgagccgaccaagggc
atcgacatcggctccaaggccgccgtgcatcgcttcatcggcgaactggtggcgcagggc
ctggcggtgatcctggtgtcttcggaactgccggaggtgatgggcatgtcggaccgcatc
gtggtcatgcaccagggccgcgtgcaacaggtcttcagccgcgccgaagccagcgccgag
gcgctggccgccgctgcctcgggcggcctgcacgccgacgctgcaaccgcaacccttgcc
ggagaggccacatggcattga
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