Herbaspirillum seropedicae SmR1: Hsero_4447
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Entry
Hsero_4447 CDS
T01268
Name
(GenBank) ABC-type sugar transport system, periplasmic component protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_4447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4447
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
Hsero_4447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ADJ65913
UniProt:
D8IVV5
LinkDB
All DBs
Position
complement(5082281..5083315)
Genome browser
AA seq
344 aa
AA seq
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MTRNTFNAAARPLRAALLALAAGAIGLIAAAPAHAAEKVRIAMVVKSLGNGFFDAAHEGA
KEAARELGDVEVIYTGPTTPTAEGQIEIVNSLISQKVDAIVISANDANALVPITKRAMQR
GVKVLSFDSGIAKGGRLMQLNPSNAELIGLKQIQMAAEAIGGAGDVAILSATAQATNQNI
WIGEMKKALARPEFSRMKLVATVYGDDQSDKSYREAIGLLRSHPGLKAIIAPTTVGINAA
GKAVVDEKLVGKVYVTGLGLPSEMAGHVKSGAVKSFAIWNPIDLGYAATYAAYQFVKGKA
QGKEGESIAVGRMGSIKLDAAGEAALAPPFTYDASNVDKFAKIF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcaacacgttcaatgcggccgcacggcctttacgcgcagcgttgctggccctg
gccgccggcgccatcggtctgatcgccgccgcccccgcccatgcggccgagaaggtacgt
atcgccatggtggtcaagagcctgggcaacggcttcttcgacgccgcccatgaaggcgcc
aaggaagccgcgcgcgaactgggtgatgtggaggtcatctataccggcccgaccacaccg
accgccgaagggcagatcgagatcgtcaattccctgatcagccagaaggtcgacgccatc
gtcatctcggccaacgacgccaatgcgctggtgcccatcaccaagcgcgccatgcagcgt
ggcgtgaaggtgctgtccttcgacagcggcatcgccaagggcggccgcctgatgcagctc
aatccctccaatgccgagctcattggtctgaagcagatccagatggccgctgaggccatc
ggcggcgcgggtgacgtggcgatcctgtcggccaccgcgcaggccaccaaccagaacatc
tggatcggcgagatgaagaaggcgctggcccgtcccgagttctcgcgcatgaagctggtg
gccaccgtctatggcgacgaccagtccgacaagagctatcgcgaagccattggcctgttg
cgcagccatcctggcctcaaggccatcatcgcgccgaccaccgtgggcatcaatgcggcc
ggcaaggcggtggtcgatgagaagctggtcggcaaggtctacgtgaccggcctgggcctg
ccctcggagatggcaggccacgtcaagagcggcgcggtcaagagcttcgccatctggaat
ccgatcgacctcggctacgccgcgacctatgccgcctaccagttcgtcaagggcaaggcc
cagggcaaggaaggcgagagcattgccgtgggacgcatgggcagcatcaagctggacgcc
gcaggcgaggcagccctggcgccgccctttacctacgacgccagcaacgtggacaaattc
gccaagatcttctga
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