Herbaspirillum seropedicae SmR1: Hsero_4488
Help
Entry
Hsero_4488 CDS
T01268
Symbol
cirA
Name
(GenBank) TonB-dependent siderophore receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4488 (cirA)
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_4488 (cirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ADJ65954
UniProt:
D8IWR7
LinkDB
All DBs
Position
complement(5132919..5135009)
Genome browser
AA seq
696 aa
AA seq
DB search
MTSVAARRRRARRPDHLHRVRPLVRATALGGLLAFSAVPDALAQSTASSEDAALTLGTVE
VSGRRSGPLQLRNVLTSVDLIGADRLQQQQVLYNWELFAQSPGVMLTQFRQGNESGKLSF
RGFNGEGEVNAVKLLIDGVPSNDNAGGMPFLGTLFPLDMAGIEVVRGTNDARYGLHNIAG
NVNILTRQGGNYDEARLTYGSFNTRQVQVAKGVENGNWSQNYFLGYEKSDGYREHAQAEN
IAFSGKWFYTSDDGRYRTGLSIRHANAYAQEPGYLTAEDARANPRTSYAYAQSDGGNRQL
DQVSLHFDGDIDDQLAVGAKLYLNRVRDQRWLRYSSTTSQQERLIDETHYGLMTTATYRP
QWKALEGMNDLALEGGFNVERQEDQSPRFNTVNKVRVTQTRDHHFTFDTFGAYLQAVIKP
VESFKIIPGYRVDKVGGSFSDPSRGVRYGIQDYGVIRQPKLSVVYAPIKQASLYANWGRT
FQVGAGAAAYKSNNNDLRPSINDGWESGVKFTPVEWLDGRLAWWEQRASDEVKRRLNDPT
GDSENVGRTKRSGVDLQLNLRAGKRTTMWLAYSRQRSEIITPDPTAPATIGKEIDHVPRY
LFSGGVDYQATDYLKLSTSLNGQGSYYLTTANTGGKFGGYTLVDASASYQVSPTLALELQ
VKNLANRYYEYVWINDQTRHAPGDGRAAYLSAKLTY
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgttgcagcccgacgccggcgcgcccgccgtcctgatcaccttcatcgcgtg
cgccccttggtgcgcgccaccgccctgggcggcctgctggccttctccgctgtacctgat
gcactggcccagtccactgccagtagcgaggacgctgcgctcaccctgggaacagtagaa
gtcagcggccgccgcagcggcccgctgcaactgcgcaatgtgctgacctcggtcgacctg
atcggtgcggaccgcctgcagcaacagcaggtgttgtacaactgggagctcttcgcgcag
tcgcccggcgtgatgctgacccaattccgccagggcaacgagtccggcaagctgtccttc
cggggcttcaatggcgagggcgaggtcaatgcggtcaagctgctcatcgatggcgttccc
agcaatgacaatgccggcggcatgcccttcctgggcacgctgttcccgctggacatggcg
ggcatcgaggtcgtgcgcggcaccaacgatgcacgctatggcctgcacaacatcgccggc
aacgtcaacatcctcacccgccagggcggcaactacgacgaggcgcggttgacctacggc
agtttcaatacacgccaggtccaggtcgccaagggcgtggaaaacggcaactggtcgcag
aactatttcctcggctacgaaaaatcggatggctaccgcgagcatgcccaggccgagaac
atcgctttttccggcaagtggttctataccagcgatgatggccgttaccgcacgggcctg
agcatccgccatgccaacgcctacgcccaggagccgggctatctgacggcagaggatgcg
cgcgccaatccgcgtacctcctacgcctatgcacaatccgacggcggcaaccgccagctc
gatcaggtcagcctgcacttcgatggcgatatcgatgaccagcttgccgtcggcgccaag
ctctacctgaaccgcgtgcgcgaccagcgctggctgcgttattcctccaccacctcgcag
caggaacggctgatcgatgaaacccattacgggctcatgaccacggccacctatcggcca
cagtggaaggcgctggaagggatgaatgatctggctctggagggcggattcaacgtcgag
cgccaggaagaccagagcccgcgcttcaacaccgtcaacaaggtccgggtgacgcagacc
cgcgatcatcacttcaccttcgataccttcggcgcatatctgcaggcggtgatcaagccg
gtggaatccttcaagatcatccccggctatcgggtcgacaaggtcggcggcagctttagc
gatccctcacgtggtgtgcgctatggcatccaggactatggcgtgatcaggcaacccaag
ctcagcgtcgtctacgcccccatcaagcaggccagcctgtatgccaactggggccgcacc
ttccaggtcggcgcgggcgcggcggcctacaagtccaacaacaacgatctgcgtccctct
atcaacgatggctgggagagcggcgtgaaattcactccggtcgagtggctcgatggccgc
ctcgcatggtgggagcagcgcgcctcggacgaggtcaagcgccgcctcaacgatcccacg
ggcgattccgaaaacgtcggccgcaccaagcgcagcggcgtggacctgcagctgaacctg
cgcgccggcaagcgcaccacgatgtggctggcctactcacgccagcgttcggaaatcatc
acgcccgatcccaccgccccggccaccatcggcaaggaaatcgaccacgttccgcgttac
ctcttctccggcggcgtcgattaccaggccaccgactatctgaagctatcgacctcgttg
aacgggcagggcagctattacctgacgaccgccaacaccggcggcaagttcggcggctat
accctggtcgatgcaagcgccagctatcaggtctcgcccacgctggcgctggagttgcag
gtcaagaacctggccaaccgctactacgagtatgtgtggatcaatgaccagacccgccac
gcaccgggtgatgggcgggcggcgtacctgtcggccaagctgacgtattga
DBGET
integrated database retrieval system
